RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 NPHP1O15259 732 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 DPEP1P16444 411 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 CHRNA5P30532 468 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 FLIIQ13045 1269 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 NBR1Q14596 966 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 SUSD4Q5VX71 490 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 RIC3Q7Z5B4 369 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 ZNF34Q8IZ26 560 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 BCL2L13Q9BXK5 485 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 CHMP4AQ9BY43 222 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 ANKRD31Q8N7Z5 1873 aa7.11□□□□□ -1.27
LINC00550-202ENST00000629570 ANKRD36CQ5JPF3 1778 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 COL11A2P13942 1736 aaPredicted RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 TNRC6CQ9HCJ0 1690 aaKnown RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 A0A0G2JLW4 131 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 PI4KAP2A4QPH2 592 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 NTSR2O95665 410 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 TCIRG1Q13488 830 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 TSR1Q2NL82 804 aaKnown RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 HSP90AB3PQ58FF7 597 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 NLRP10Q86W26 655 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 PI4KAP1Q8N8J0 262 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 SSH1Q8WYL5 1049 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
LINC00550-202ENST00000629570 N4BP2Q86UW6 1770 aaPredicted RBP7.1□□□□□ -1.27
LINC00550-202ENST00000629570 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
LINC00550-202ENST00000629570 MAP3K7O43318 606 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 DDX58O95786 925 aaKnown RBP7.09□□□□□ -1.27
LINC00550-202ENST00000629570 YBX3P16989 372 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00550-202ENST00000629570 KCNA3P22001 575 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 TGFB2P61812 414 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 ST5P78524 1137 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 ERFEQ4G0M1 354 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 PARP10Q53GL7 1025 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 KSR2Q6VAB6 950 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 TPTE2Q6XPS3 522 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 SYNE4Q8N205 404 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 BBXQ8WY36 941 aaPredicted RBP7.09□□□□□ -1.27
LINC00550-202ENST00000629570 LRCH3Q96II8 777 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 MYD88Q99836 296 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 ISCA1Q9BUE6 129 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 TSKSQ9UJT2 592 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
LINC00550-202ENST00000629570 F6X3S4 739 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 IGKV5-2P06315 115 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 KCNC4Q03721 635 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 CWF19L2Q2TBE0 894 aaKnown RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 PPP1R42Q7Z4L9 355 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 C2CD5Q86YS7 1000 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 DNAAF4Q8WXU2 420 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 YTHDC1Q96MU7 727 aaKnown RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 METTL22Q9BUU2 404 aaPredicted RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 UTP14AQ9BVJ6 771 aaKnown RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 NYXQ9GZU5 481 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 BRCA1P38398 1863 aaKnown RBP7.08□□□□□ -1.28
LINC00550-202ENST00000629570 DLEC1Q9Y238 1755 aa7.08□□□□□ -1.28
LINC00550-202ENST00000629570 SH3TC1Q8TE82 1336 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 NEURL1BA8MQ27 555 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 CT47B1P0C2W7 299 aaPredicted RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 SRGNP10124 158 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 HCLS1P14317 486 aaPredicted RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 PDE6BP35913 854 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 RARSP54136 660 aaKnown RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 GPR162Q16538 588 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 ALDH1L2Q3SY69 923 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 PACS2Q86VP3 889 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 JARID2Q92833 1246 aaPredicted RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 FAM89AQ96GI7 184 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 TRMT112Q9UI30 125 aaKnown RBP7.07□□□□□ -1.28
LINC00550-202ENST00000629570 BCS1LQ9Y276 419 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 RIC1Q4ADV7 1423 aa7.07□□□□□ -1.28
LINC00550-202ENST00000629570 RNF123Q5XPI4 1314 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 SPDYE16A6NNV3 312 aaPredicted RBP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 H0YIN7 160 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 CRY2Q49AN0 593 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 DALRD3Q5D0E6 543 aaKnown RBP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 SLC51AQ86UW1 340 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 CCDC191Q8NCU4 936 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 ZNF622Q969S3 477 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 CWC25Q9NXE8 425 aaPredicted RBP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
LINC00550-202ENST00000629570 DDX60Q8IY21 1712 aaKnown RBP7.06□□□□□ -1.28
LINC00550-202ENST00000629570 PTPRCP08575 1304 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
LINC00550-202ENST00000629570 BCAR3O75815 825 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 NPR1P16066 1061 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 GCKRQ14397 625 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms