RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 ADARB2Q9NS39 739 aaKnown RBP21.89■■□□□ 1.09
SPTAN1-214ENST00000628614 MYH3P11055 1940 aa21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 XDHP47989 1333 aa21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 E9PSI1 815 aa21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 MAP1SQ66K74 1059 aaPredicted RBP21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 CNTROBQ8N137 903 aa21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 ZC3H12CQ9C0D7 883 aaKnown RBP21.88■■□□□ 1.09
SPTAN1-214ENST00000628614 F6X3S4 739 aa21.87■■□□□ 1.09
SPTAN1-214ENST00000628614 ECE2O60344 883 aa21.87■■□□□ 1.09
SPTAN1-214ENST00000628614 CASP7P55210 303 aa21.87■■□□□ 1.09
SPTAN1-214ENST00000628614 BSDC1Q9NW68 430 aaPredicted RBP21.87■■□□□ 1.09
SPTAN1-214ENST00000628614 BEND3Q5T5X7 828 aa21.86■■□□□ 1.09
SPTAN1-214ENST00000628614 GPR101Q96P66 508 aaPredicted RBP21.86■■□□□ 1.09
SPTAN1-214ENST00000628614 DOK7Q18PE1 504 aa21.85■■□□□ 1.09
SPTAN1-214ENST00000628614 TMEM88BA6NKF7 163 aa21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 G3V3G9 751 aa21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 PSMD14O00487 310 aa21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 ATP2B4P23634 1241 aa21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 IGHMBP2P38935 993 aaKnown RBP21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
SPTAN1-214ENST00000628614 CSF1RP07333 972 aa21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 ITGA6P23229 1130 aa21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 FAM161AQ3B820 660 aa21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 DPF2Q92785 391 aa21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 MINPP1Q9UNW1 487 aa21.83■■□□□ 1.09
SPTAN1-214ENST00000628614 PCNTO95613 3336 aa21.82■■□□□ 1.08
SPTAN1-214ENST00000628614 H7C1D1 291 aa21.82■■□□□ 1.08
SPTAN1-214ENST00000628614 RPS12P25398 132 aaKnown RBP21.82■■□□□ 1.08
SPTAN1-214ENST00000628614 SLFN5Q08AF3 891 aa21.82■■□□□ 1.08
SPTAN1-214ENST00000628614 ALDH1L1O75891 902 aa21.81■■□□□ 1.08
SPTAN1-214ENST00000628614 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
SPTAN1-214ENST00000628614 ZBTB12Q9Y330 459 aaPredicted RBP21.81■■□□□ 1.08
SPTAN1-214ENST00000628614 CNTNAP1P78357 1384 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 MED23Q9ULK4 1368 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 GRM8O00222 908 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 SLC4A10Q6U841 1118 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 MPHOSPH8Q99549 860 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 MKRN1Q9UHC7 482 aaKnown RBP21.8■■□□□ 1.08
SPTAN1-214ENST00000628614 SPEF2Q9C093 1822 aa21.79■■□□□ 1.08
SPTAN1-214ENST00000628614 CCT4P50991 539 aaKnown RBP21.79■■□□□ 1.08
SPTAN1-214ENST00000628614 KCNQ5Q9NR82 932 aa21.79■■□□□ 1.08
SPTAN1-214ENST00000628614 C9orf78Q9NZ63 289 aaPredicted RBP21.79■■□□□ 1.08
SPTAN1-214ENST00000628614 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 VIL1P09327 827 aaKnown RBP21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 FOXO4P98177 505 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 MRPL50Q8N5N7 158 aaKnown RBP21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 TRPM4Q8TD43 1214 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 ANKRD2Q9GZV1 360 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 PGAP2Q9UHJ9 254 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 PTPRCP08575 1304 aa21.78■■□□□ 1.08
SPTAN1-214ENST00000628614 SHTN1A0MZ66 631 aa21.77■■□□□ 1.08
SPTAN1-214ENST00000628614 IFIT5Q13325 482 aaKnown RBP21.77■■□□□ 1.08
SPTAN1-214ENST00000628614 PODNQ7Z5L7 613 aa21.77■■□□□ 1.08
SPTAN1-214ENST00000628614 LEMD3Q9Y2U8 911 aa21.77■■□□□ 1.08
SPTAN1-214ENST00000628614 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
SPTAN1-214ENST00000628614 ZNF609O15014 1411 aa21.76■■□□□ 1.07
SPTAN1-214ENST00000628614 HIRAP54198 1017 aaPredicted RBP21.76■■□□□ 1.07
SPTAN1-214ENST00000628614 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
SPTAN1-214ENST00000628614 SSH1Q8WYL5 1049 aa21.75■■□□□ 1.07
SPTAN1-214ENST00000628614 SCN9AQ15858 1988 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 RASSF10A6NK89 507 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 TRAF5O00463 557 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 RSBN1LQ6PCB5 846 aaPredicted RBP21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 SAMD7Q7Z3H4 446 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 AGBL3Q8NEM8 1001 aa21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 ABT1Q9ULW3 272 aaKnown RBP21.74■■□□□ 1.07
SPTAN1-214ENST00000628614 USP17L3A6NCW0 530 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 USP17L4A6NCW7 530 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 WTIPA6NIX2 430 aaPredicted RBP21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 CT47B1P0C2W7 299 aaPredicted RBP21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 CHRNDQ07001 517 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 CCDC57Q2TAC2 916 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 TBC1D10BQ4KMP7 808 aaPredicted RBP21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 USP17L1Q7RTZ2 530 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 ZNF804BA4D1E1 1349 aa21.73■■□□□ 1.07
SPTAN1-214ENST00000628614 KCNJ4P48050 445 aa21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 FMR1Q06787 632 aaKnown RBP eCLIP21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 TAF7LQ5H9L4 462 aa21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 EPHA10Q5JZY3 1008 aa21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 CDC37L1Q7L3B6 337 aa21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 GLIS2Q9BZE0 524 aaPredicted RBP21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 COA1Q9GZY4 146 aa21.72■■□□□ 1.07
SPTAN1-214ENST00000628614 HSPA1AP0DMV8 641 aaKnown RBP21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 HSPA1BP0DMV9 641 aaKnown RBP21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 VEGFBP49765 207 aa21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 DEFB115Q30KQ5 88 aa21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 SMC4Q9NTJ3 1288 aa21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 UTYO14607 1347 aa21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 PSME4Q14997 1843 aa21.71■■□□□ 1.07
SPTAN1-214ENST00000628614 KIF4BQ2VIQ3 1234 aa21.7■■□□□ 1.06
SPTAN1-214ENST00000628614 CST9Q5W186 159 aa21.7■■□□□ 1.06
SPTAN1-214ENST00000628614 TRPM7Q96QT4 1865 aa21.69■■□□□ 1.06
SPTAN1-214ENST00000628614 CELF2O95319 508 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms