RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 TOP2AP11388 1531 aaKnown RBP5.82□□□□□ -1.48
CDKL5-208ENST00000624953 SOWAHDA6NJG2 315 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 NID1P14543 1247 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 KCNA1Q09470 495 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 NEUROD1Q13562 356 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 DHX32Q7L7V1 743 aaKnown RBP5.81□□□□□ -1.48
CDKL5-208ENST00000624953 NLRP13Q86W25 1043 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 MICALL1Q8N3F8 863 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 GPR152Q8TDT2 470 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 CHRDQ9H2X0 955 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 GGNBP2Q9H3C7 697 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 SUV39H2Q9H5I1 410 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 DNAJB12Q9NXW2 375 aaKnown RBP5.81□□□□□ -1.48
CDKL5-208ENST00000624953 FRRS1LQ9P0K9 344 aa5.81□□□□□ -1.48
CDKL5-208ENST00000624953 TOPBP1Q92547 1522 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 MMP20O60882 483 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 SASH3O75995 380 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 ALBP02768 609 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 RPLP1P05386 114 aaKnown RBP5.8□□□□□ -1.48
CDKL5-208ENST00000624953 FURINP09958 794 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 BAG6P46379 1132 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 CMTR1Q8N1G2 835 aaKnown RBP5.8□□□□□ -1.48
CDKL5-208ENST00000624953 EDEM1Q92611 657 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 NUDT16Q96DE0 195 aaKnown RBP5.8□□□□□ -1.48
CDKL5-208ENST00000624953 TRIM11Q96F44 468 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 FAM129BQ96TA1 746 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 LPIN3Q9BQK8 851 aa5.8□□□□□ -1.48
CDKL5-208ENST00000624953 RRAGCQ9HB90 399 aa5.79□□□□□ -1.48
CDKL5-208ENST00000624953 CCDC87Q9NVE4 849 aa5.79□□□□□ -1.48
CDKL5-208ENST00000624953 POLIQ9UNA4 740 aa5.79□□□□□ -1.48
CDKL5-208ENST00000624953 CLASP1Q7Z460 1538 aa5.79□□□□□ -1.48
CDKL5-208ENST00000624953 KIF13AQ9H1H9 1805 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 IFT140Q96RY7 1462 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 WDR97A6NE52 1622 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 UBAP1LF5GYI3 381 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 H3BRB1 525 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 K7ELQ4 463 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-208ENST00000624953 RARAP10276 462 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 PCSK7Q16549 785 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-208ENST00000624953 CCER1Q8TC90 406 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-208ENST00000624953 TUT1Q9H6E5 874 aaKnown RBP5.78□□□□□ -1.48
CDKL5-208ENST00000624953 TMEM63CQ9P1W3 806 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 MKL2Q9ULH7 1088 aa5.78□□□□□ -1.48
CDKL5-208ENST00000624953 DNMBPQ6XZF7 1577 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 TM4SF5O14894 197 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 USP5P45974 858 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 PLAURQ03405 335 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 PERM1Q5SV97 790 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
CDKL5-208ENST00000624953 CITED4Q96RK1 184 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 RBCK1Q9BYM8 510 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 ELP3Q9H9T3 547 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 ANO2Q9NQ90 1003 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 CNTN3Q9P232 1028 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 SALL4Q9UJQ4 1053 aa5.77□□□□□ -1.49
CDKL5-208ENST00000624953 FNDC3AQ9Y2H6 1198 aaKnown RBP5.77□□□□□ -1.49
CDKL5-208ENST00000624953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.77□□□□□ -1.49
CDKL5-208ENST00000624953 NFKBIEO00221 500 aa5.76□□□□□ -1.49
CDKL5-208ENST00000624953 GNB5O14775 395 aa5.76□□□□□ -1.49
CDKL5-208ENST00000624953 ALAS2P22557 587 aa5.76□□□□□ -1.49
CDKL5-208ENST00000624953 AFF1P51825 1210 aaKnown RBP5.76□□□□□ -1.49
CDKL5-208ENST00000624953 ALKBH8Q96BT7 664 aaKnown RBP5.76□□□□□ -1.49
CDKL5-208ENST00000624953 PNMA5Q96PV4 448 aa5.76□□□□□ -1.49
CDKL5-208ENST00000624953 UBE2OQ9C0C9 1292 aaKnown RBP5.76□□□□□ -1.49
CDKL5-208ENST00000624953 ABI2Q9NYB9 513 aaPredicted RBP5.76□□□□□ -1.49
CDKL5-208ENST00000624953 PBRM1Q86U86 1689 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 RSF1Q96T23 1441 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-208ENST00000624953 M0R082 166 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 TNFRSF21O75509 655 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 ABL1P00519 1130 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 DNM1Q05193 864 aaKnown RBP5.75□□□□□ -1.49
CDKL5-208ENST00000624953 EHHADHQ08426 723 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 CYB5RLQ6IPT4 315 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 C8orf86Q6ZUL3 223 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 KRT25Q7Z3Z0 450 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 GLYCTKQ8IVS8 523 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 Q8N3U1 123 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 CEP120Q8N960 986 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 ZNF417Q8TAU3 575 aa5.75□□□□□ -1.49
CDKL5-208ENST00000624953 ZNF587Q96SQ5 575 aaPredicted RBP5.75□□□□□ -1.49
CDKL5-208ENST00000624953 AQRO60306 1485 aaKnown RBP eCLIP5.75□□□□□ -1.49
CDKL5-208ENST00000624953 LOC102724428A0A0B4J2F2 783 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 A6NHS1 94 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 CYP2E1P05181 493 aaPredicted RBP5.74□□□□□ -1.49
CDKL5-208ENST00000624953 PSAPP07602 524 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 ITGB7P26010 798 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 SIK1P57059 783 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 ADAMTSL4Q6UY14 1074 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 C1orf127Q8N9H9 656 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 IVNS1ABPQ9Y6Y0 642 aa5.74□□□□□ -1.49
CDKL5-208ENST00000624953 CCDC88BA6NC98 1476 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 C1QTNF9BB2RNN3 333 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 GPR182O15218 404 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 AMPD1P23109 780 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 CHRNA4P43681 627 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 DSC3Q14574 896 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 PSAPL1Q6NUJ1 521 aa5.73□□□□□ -1.49
CDKL5-208ENST00000624953 SNX29Q8TEQ0 813 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms