RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 R3HDMLQ9H3Y0 253 aa9.64□□□□□ -0.87
LINC00963-218ENST00000624138 POLLQ9UGP5 575 aa9.64□□□□□ -0.87
LINC00963-218ENST00000624138 UBE2Q2LH0YL09 131 aa9.63□□□□□ -0.87
LINC00963-218ENST00000624138 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
LINC00963-218ENST00000624138 SCARF1Q14162 830 aa9.63□□□□□ -0.87
LINC00963-218ENST00000624138 ANGEL2Q5VTE6 544 aaKnown RBP9.63□□□□□ -0.87
LINC00963-218ENST00000624138 MOB2Q70IA6 237 aa9.63□□□□□ -0.87
LINC00963-218ENST00000624138 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
LINC00963-218ENST00000624138 NSFL1CQ9UNZ2 370 aaKnown RBP9.63□□□□□ -0.87
LINC00963-218ENST00000624138 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 PDIA6Q15084 440 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 NLRP10Q86W26 655 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 AGBL3Q8NEM8 1001 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 EYA3Q99504 573 aa9.62□□□□□ -0.87
LINC00963-218ENST00000624138 COLQQ9Y215 455 aaPredicted RBP9.62□□□□□ -0.87
LINC00963-218ENST00000624138 SH3TC1Q8TE82 1336 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 GPSM2P81274 684 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 HSP90AB3PQ58FF7 597 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 OTOP1Q7RTM1 612 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 GMLQ99445 158 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
LINC00963-218ENST00000624138 NUDCQ9Y266 331 aa9.61□□□□□ -0.87
LINC00963-218ENST00000624138 CLSPNQ9HAW4 1339 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 DLL1O00548 723 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 U2AF1L5P0DN76 240 aaPredicted RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 EN2P19622 333 aaPredicted RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 U2AF1Q01081 240 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 SF3B3Q15393 1217 aaKnown RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 CELF1Q92879 486 aaKnown RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 ARMC5Q96C12 935 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 CFAP53Q96M91 514 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
LINC00963-218ENST00000624138 TRIM17Q9Y577 477 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 MYH3P11055 1940 aa9.6□□□□□ -0.87
LINC00963-218ENST00000624138 SPEF2Q9C093 1822 aa9.59□□□□□ -0.87
LINC00963-218ENST00000624138 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
LINC00963-218ENST00000624138 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
LINC00963-218ENST00000624138 MYOZ2Q9NPC6 264 aa9.59□□□□□ -0.87
LINC00963-218ENST00000624138 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
LINC00963-218ENST00000624138 PTPN22Q9Y2R2 807 aa9.59□□□□□ -0.87
LINC00963-218ENST00000624138 USP17L8P0C7I0 530 aa9.58□□□□□ -0.88
LINC00963-218ENST00000624138 INHBEP58166 350 aa9.58□□□□□ -0.88
LINC00963-218ENST00000624138 PTPN12Q05209 780 aaKnown RBP9.58□□□□□ -0.88
LINC00963-218ENST00000624138 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
LINC00963-218ENST00000624138 PROSER3Q2NL68 480 aa9.58□□□□□ -0.88
LINC00963-218ENST00000624138 PRAMEF18Q5VWM3 479 aa9.58□□□□□ -0.88
LINC00963-218ENST00000624138 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
LINC00963-218ENST00000624138 ANXA1P04083 346 aa9.57□□□□□ -0.88
LINC00963-218ENST00000624138 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
LINC00963-218ENST00000624138 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
LINC00963-218ENST00000624138 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
LINC00963-218ENST00000624138 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
LINC00963-218ENST00000624138 COPS6Q7L5N1 327 aa9.57□□□□□ -0.88
LINC00963-218ENST00000624138 COL6A3P12111 3177 aa9.57□□□□□ -0.88
LINC00963-218ENST00000624138 OTOFQ9HC10 1997 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 MANSC4A6NHS7 340 aaPredicted RBP9.56□□□□□ -0.88
LINC00963-218ENST00000624138 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
LINC00963-218ENST00000624138 NF2P35240 595 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 ARMC9Q7Z3E5 817 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 ERO1AQ96HE7 468 aa9.56□□□□□ -0.88
LINC00963-218ENST00000624138 G3V3G9 751 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
LINC00963-218ENST00000624138 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 SLC17A8Q8NDX2 589 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 FAM89AQ96GI7 184 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
LINC00963-218ENST00000624138 ZSWIM8A7E2V4 1837 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 H0YGN5 161 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 IGF2BP3O00425 579 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC00963-218ENST00000624138 WNT10BO00744 389 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 UFL1O94874 794 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 ZBTB48P10074 688 aaPredicted RBP9.54□□□□□ -0.88
LINC00963-218ENST00000624138 MMP14P50281 582 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 CAP1Q01518 475 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
LINC00963-218ENST00000624138 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 CD99L2Q8TCZ2 262 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 ZNF333Q96JL9 665 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 EFCC1Q9HA90 598 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 GGA1Q9UJY5 639 aa9.54□□□□□ -0.88
LINC00963-218ENST00000624138 CUL9Q8IWT3 2517 aa9.53□□□□□ -0.88
LINC00963-218ENST00000624138 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
LINC00963-218ENST00000624138 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
LINC00963-218ENST00000624138 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
LINC00963-218ENST00000624138 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms