RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 IQCEQ6IPM2 695 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 KCNG4Q8TDN1 519 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 ZNF287Q9HBT7 754 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 CYP7A1P22680 504 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
GABRB3-215ENST00000622697 GADD45BO75293 160 aaPredicted RBP18.59■□□□□ 0.57
GABRB3-215ENST00000622697 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 ERLIN2O94905 339 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 CAVIN2O95810 425 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 ZFYP08048 801 aaPredicted RBP18.59■□□□□ 0.57
GABRB3-215ENST00000622697 IDEP14735 1019 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 TAF4BQ92750 862 aa18.59■□□□□ 0.57
GABRB3-215ENST00000622697 ZMYM3Q14202 1370 aa18.58■□□□□ 0.57
GABRB3-215ENST00000622697 RNF113AO15541 343 aaKnown RBP18.58■□□□□ 0.57
GABRB3-215ENST00000622697 MTIF2P46199 727 aaKnown RBP18.58■□□□□ 0.57
GABRB3-215ENST00000622697 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.57
GABRB3-215ENST00000622697 TAX1BP1Q86VP1 789 aa18.58■□□□□ 0.56
GABRB3-215ENST00000622697 IP6K1Q92551 441 aa18.58■□□□□ 0.56
GABRB3-215ENST00000622697 SPTLC2O15270 562 aa18.58■□□□□ 0.56
GABRB3-215ENST00000622697 YEATS4O95619 227 aa18.58■□□□□ 0.56
GABRB3-215ENST00000622697 UQCRFS1P1P0C7P4 283 aa18.58■□□□□ 0.56
GABRB3-215ENST00000622697 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
GABRB3-215ENST00000622697 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.56
GABRB3-215ENST00000622697 DNAI1Q9UI46 699 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 RTL1A6NKG5 1358 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 TDRD12Q587J7 1177 aaKnown RBP18.57■□□□□ 0.56
GABRB3-215ENST00000622697 CCDC150Q8NCX0 1101 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
GABRB3-215ENST00000622697 RTN1Q16799 776 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 DHX32Q7L7V1 743 aaKnown RBP18.57■□□□□ 0.56
GABRB3-215ENST00000622697 CHAMP1Q96JM3 812 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 MIGA1Q8NAN2 632 aa18.57■□□□□ 0.56
GABRB3-215ENST00000622697 SLC27A2O14975 620 aa18.56■□□□□ 0.56
GABRB3-215ENST00000622697 UBA7P41226 1012 aa18.56■□□□□ 0.56
GABRB3-215ENST00000622697 C17orf53Q8N3J3 647 aaPredicted RBP18.56■□□□□ 0.56
GABRB3-215ENST00000622697 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
GABRB3-215ENST00000622697 N4BP3O15049 544 aa18.56■□□□□ 0.56
GABRB3-215ENST00000622697 KIAA0754O94854 1291 aa18.56■□□□□ 0.56
GABRB3-215ENST00000622697 TRMT1LQ7Z2T5 733 aaKnown RBP18.56■□□□□ 0.56
GABRB3-215ENST00000622697 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
GABRB3-215ENST00000622697 DDX21Q9NR30 783 aaKnown RBP eCLIP18.56■□□□□ 0.56
GABRB3-215ENST00000622697 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 KDM5CP41229 1560 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 A0A1B0GVL5 298 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 SGSM2O43147 1006 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 PKP1Q13835 747 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
GABRB3-215ENST00000622697 INSRP06213 1382 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 C6orf229H3BNL8 230 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.55■□□□□ 0.56
GABRB3-215ENST00000622697 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
GABRB3-215ENST00000622697 IFIT1BQ5T764 474 aaKnown RBP18.55■□□□□ 0.56
GABRB3-215ENST00000622697 PDE4BQ07343 736 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 TSG101Q99816 390 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 LIG1P18858 919 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 TRMT2AQ8IZ69 625 aaKnown RBP18.54■□□□□ 0.56
GABRB3-215ENST00000622697 KRT23Q9C075 422 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 TCP11L1Q9NUJ3 509 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 GTF2F1P35269 517 aaKnown RBP eCLIP18.54■□□□□ 0.56
GABRB3-215ENST00000622697 CCDC152Q4G0S7 254 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 RPGRQ92834 1020 aaKnown RBP18.54■□□□□ 0.56
GABRB3-215ENST00000622697 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
GABRB3-215ENST00000622697 DHX58Q96C10 678 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 GBP3Q9H0R5 595 aa18.54■□□□□ 0.56
GABRB3-215ENST00000622697 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 KIF5BP33176 963 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 RDXP35241 583 aaKnown RBP18.53■□□□□ 0.56
GABRB3-215ENST00000622697 TMEM266Q2M3C6 531 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.56
GABRB3-215ENST00000622697 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 FAM89AQ96GI7 184 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 IFNKQ9P0W0 207 aa18.53■□□□□ 0.56
GABRB3-215ENST00000622697 KANK3Q6NY19 840 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.56
GABRB3-215ENST00000622697 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 SBNO1A3KN83 1393 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 ABCC4O15439 1325 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 NEFHP12036 1026 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 STX17P56962 302 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 TNNI3KQ59H18 835 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 ESR2Q92731 530 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.56
GABRB3-215ENST00000622697 EDC3Q96F86 508 aaKnown RBP18.52■□□□□ 0.55
GABRB3-215ENST00000622697 TRIM47Q96LD4 638 aa18.52■□□□□ 0.55
GABRB3-215ENST00000622697 NBPF6Q5VWK0 638 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms