RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 FOXD4L5Q5VV16 416 aaPredicted RBP16.72■□□□□ 0.27
EPB42-210ENST00000622454 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 FOXD4L4Q8WXT5 416 aaPredicted RBP16.72■□□□□ 0.27
EPB42-210ENST00000622454 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
EPB42-210ENST00000622454 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 CTSWP56202 376 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 KRT32Q14532 448 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
EPB42-210ENST00000622454 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
EPB42-210ENST00000622454 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
EPB42-210ENST00000622454 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
EPB42-210ENST00000622454 KCNQ2O43526 872 aa16.71■□□□□ 0.27
EPB42-210ENST00000622454 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
EPB42-210ENST00000622454 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.27
EPB42-210ENST00000622454 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
EPB42-210ENST00000622454 LARGE1O95461 756 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 CHGBP05060 677 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ITGA6P23229 1130 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 GORABQ5T7V8 394 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
EPB42-210ENST00000622454 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 MRE11P49959 708 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 ZNF34Q8IZ26 560 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 XAGE2Q96GT9 111 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 GREM2Q9H772 168 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 RREB1Q92766 1687 aa16.7■□□□□ 0.26
EPB42-210ENST00000622454 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 PDE8AO60658 829 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 XRCC6P12956 609 aaKnown RBP eCLIP16.69■□□□□ 0.26
EPB42-210ENST00000622454 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 SIK1P57059 783 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
EPB42-210ENST00000622454 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 TCHHQ07283 1943 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
EPB42-210ENST00000622454 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
EPB42-210ENST00000622454 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
EPB42-210ENST00000622454 RIC1Q4ADV7 1423 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 ME3Q16798 604 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
EPB42-210ENST00000622454 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
EPB42-210ENST00000622454 ADORA1P30542 326 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
EPB42-210ENST00000622454 METTL24Q5JXM2 366 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 CHAMP1Q96JM3 812 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 AK7Q96M32 723 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
EPB42-210ENST00000622454 MYH7P12883 1935 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
EPB42-210ENST00000622454 SYT1P21579 422 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
EPB42-210ENST00000622454 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 GRPEL1Q9HAV7 217 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
EPB42-210ENST00000622454 STX6O43752 255 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 CYP21A2P08686 494 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
EPB42-210ENST00000622454 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 ZSCAN22P10073 491 aaPredicted RBP16.66■□□□□ 0.26
EPB42-210ENST00000622454 GJB2P29033 226 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
EPB42-210ENST00000622454 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
EPB42-210ENST00000622454 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
EPB42-210ENST00000622454 AFF2P51816 1311 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 ITPK1Q13572 414 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 GPT2Q8TD30 523 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 AKAP11Q9UKA4 1901 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
EPB42-210ENST00000622454 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
EPB42-210ENST00000622454 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 GAS2L3Q86XJ1 694 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
EPB42-210ENST00000622454 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
EPB42-210ENST00000622454 MAST3O60307 1309 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 MBD3O95983 291 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
EPB42-210ENST00000622454 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 GJD4Q96KN9 370 aaPredicted RBP16.64■□□□□ 0.25
EPB42-210ENST00000622454 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
EPB42-210ENST00000622454 THSD7AQ9UPZ6 1657 aa16.63■□□□□ 0.25
EPB42-210ENST00000622454 LRP5O75197 1615 aa16.63■□□□□ 0.25
EPB42-210ENST00000622454 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms