RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 DDIT3P35638 169 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 VGLL2Q8N8G2 317 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 BCL2L12Q9HB09 334 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 C4BP0C0L5 1744 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 RTL9Q8NET4 1388 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 USPL1Q5W0Q7 1092 aa33.54■■■□□ 2.96
FMR1-219ENST00000621453 TTC39AQ5SRH9 613 aa33.53■■■□□ 2.96
FMR1-219ENST00000621453 SNX14Q9Y5W7 946 aa33.53■■■□□ 2.96
FMR1-219ENST00000621453 GOLIM4O00461 696 aa33.52■■■□□ 2.96
FMR1-219ENST00000621453 TICAM2Q86XR7 235 aa33.52■■■□□ 2.96
FMR1-219ENST00000621453 IL27Q8NEV9 243 aa33.52■■■□□ 2.96
FMR1-219ENST00000621453 PDE8BO95263 885 aa33.52■■■□□ 2.96
FMR1-219ENST00000621453 TBC1D9BQ66K14 1250 aa33.52■■■□□ 2.96
FMR1-219ENST00000621453 ABCC12Q96J65 1359 aa33.51■■■□□ 2.96
FMR1-219ENST00000621453 ZPR1O75312 459 aa33.51■■■□□ 2.96
FMR1-219ENST00000621453 FAM196AQ6ZSG2 479 aa33.51■■■□□ 2.96
FMR1-219ENST00000621453 MROH5Q6ZUA9 1318 aa33.51■■■□□ 2.95
FMR1-219ENST00000621453 MCM2P49736 904 aa33.5■■■□□ 2.95
FMR1-219ENST00000621453 KRT27Q7Z3Y8 459 aa33.5■■■□□ 2.95
FMR1-219ENST00000621453 MAP4K1Q92918 833 aa33.5■■■□□ 2.95
FMR1-219ENST00000621453 SEC31BQ9NQW1 1179 aa33.5■■■□□ 2.95
FMR1-219ENST00000621453 SRP68Q9UHB9 627 aaKnown RBP33.5■■■□□ 2.95
FMR1-219ENST00000621453 ERFEQ4G0M1 354 aa33.49■■■□□ 2.95
FMR1-219ENST00000621453 BICDL1Q6ZP65 573 aa33.49■■■□□ 2.95
FMR1-219ENST00000621453 RASEFQ8IZ41 740 aa33.49■■■□□ 2.95
FMR1-219ENST00000621453 MPHOSPH8Q99549 860 aa33.49■■■□□ 2.95
FMR1-219ENST00000621453 CIZ1Q9ULV3 898 aaPredicted RBP33.49■■■□□ 2.95
FMR1-219ENST00000621453 ZNF589Q86UQ0 364 aaPredicted RBP33.48■■■□□ 2.95
FMR1-219ENST00000621453 FOXD4L1Q9NU39 408 aa33.48■■■□□ 2.95
FMR1-219ENST00000621453 COL24A1Q17RW2 1714 aa33.48■■■□□ 2.95
FMR1-219ENST00000621453 NECTIN1Q15223 517 aa33.48■■■□□ 2.95
FMR1-219ENST00000621453 ARHGEF1Q92888 912 aaKnown RBP33.48■■■□□ 2.95
FMR1-219ENST00000621453 KCNB2Q92953 911 aa33.48■■■□□ 2.95
FMR1-219ENST00000621453 RBM8AQ9Y5S9 174 aaKnown RBP33.48■■■□□ 2.95
FMR1-219ENST00000621453 C4AP0C0L4 1744 aa33.47■■■□□ 2.95
FMR1-219ENST00000621453 CASZ1Q86V15 1759 aa33.47■■■□□ 2.95
FMR1-219ENST00000621453 AMIGO3Q86WK7 504 aa33.47■■■□□ 2.95
FMR1-219ENST00000621453 UPF3BQ9BZI7 483 aaKnown RBP33.47■■■□□ 2.95
FMR1-219ENST00000621453 PRPF40BQ6NWY9 871 aaKnown RBP33.46■■■□□ 2.95
FMR1-219ENST00000621453 FRAT2O75474 233 aaPredicted RBP33.46■■■□□ 2.95
FMR1-219ENST00000621453 IGHMBP2P38935 993 aaKnown RBP33.46■■■□□ 2.95
FMR1-219ENST00000621453 KCNJ4P48050 445 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 MCMDC2Q4G0Z9 681 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 SETDB2Q96T68 719 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 NYXQ9GZU5 481 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 LRRC4BQ9NT99 713 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 ARAP2Q8WZ64 1704 aa33.45■■■□□ 2.95
FMR1-219ENST00000621453 FKBP4Q02790 459 aaKnown RBP eCLIP33.44■■■□□ 2.94
FMR1-219ENST00000621453 PUM3Q15397 648 aaKnown RBP33.44■■■□□ 2.94
FMR1-219ENST00000621453 TAF5LO75529 589 aa33.44■■■□□ 2.94
FMR1-219ENST00000621453 CHGBP05060 677 aa33.44■■■□□ 2.94
FMR1-219ENST00000621453 FGFR2P21802 821 aa33.43■■■□□ 2.94
FMR1-219ENST00000621453 GTF2E1P29083 439 aaPredicted RBP33.43■■■□□ 2.94
FMR1-219ENST00000621453 SF3B3Q15393 1217 aaKnown RBP33.43■■■□□ 2.94
FMR1-219ENST00000621453 TRAPPC3LQ5T215 181 aa33.43■■■□□ 2.94
FMR1-219ENST00000621453 LPIN2Q92539 896 aa33.43■■■□□ 2.94
FMR1-219ENST00000621453 ZNF512BQ96KM6 892 aaPredicted RBP33.43■■■□□ 2.94
FMR1-219ENST00000621453 SLC10A5Q5PT55 438 aa33.42■■■□□ 2.94
FMR1-219ENST00000621453 CREB3L3Q68CJ9 461 aa33.42■■■□□ 2.94
FMR1-219ENST00000621453 SEC62Q99442 399 aaKnown RBP33.42■■■□□ 2.94
FMR1-219ENST00000621453 AKAP11Q9UKA4 1901 aa33.42■■■□□ 2.94
FMR1-219ENST00000621453 ZKSCAN1P17029 563 aaPredicted RBP33.42■■■□□ 2.94
FMR1-219ENST00000621453 SCARF1Q14162 830 aa33.42■■■□□ 2.94
FMR1-219ENST00000621453 HELBQ8NG08 1087 aaPredicted RBP33.42■■■□□ 2.94
FMR1-219ENST00000621453 CDC5LQ99459 802 aaKnown RBP33.42■■■□□ 2.94
FMR1-219ENST00000621453 HELLSQ9NRZ9 838 aa33.42■■■□□ 2.94
FMR1-219ENST00000621453 RFC4P35249 363 aa33.41■■■□□ 2.94
FMR1-219ENST00000621453 ZNF772Q68DY9 489 aaPredicted RBP33.41■■■□□ 2.94
FMR1-219ENST00000621453 PHF14O94880 888 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 LRRFIP1Q32MZ4 808 aaKnown RBP33.39■■■□□ 2.94
FMR1-219ENST00000621453 TMX3Q96JJ7 454 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 SSFA2P28290 1259 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 ZAP70P43403 619 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 ZMYM1Q5SVZ6 1142 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 RNF20Q5VTR2 975 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 CCDC129Q6ZRS4 1044 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 C3orf67Q6ZVT6 689 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 NBPF5PQ86XG9 351 aaPredicted RBP33.39■■■□□ 2.94
FMR1-219ENST00000621453 TM6SF1Q9BZW5 370 aa33.39■■■□□ 2.94
FMR1-219ENST00000621453 SLC27A2O14975 620 aa33.38■■■□□ 2.93
FMR1-219ENST00000621453 RNF113AO15541 343 aaKnown RBP33.38■■■□□ 2.93
FMR1-219ENST00000621453 TRIM37O94972 964 aa33.38■■■□□ 2.93
FMR1-219ENST00000621453 MCAMP43121 646 aa33.38■■■□□ 2.93
FMR1-219ENST00000621453 RBM6P78332 1123 aaKnown RBP33.38■■■□□ 2.93
FMR1-219ENST00000621453 SLC27A3Q5K4L6 730 aa33.38■■■□□ 2.93
FMR1-219ENST00000621453 UBR3Q6ZT12 1888 aa33.38■■■□□ 2.93
FMR1-219ENST00000621453 EP400Q96L91 3159 aa33.37■■■□□ 2.93
FMR1-219ENST00000621453 SLC5A1P13866 664 aa33.37■■■□□ 2.93
FMR1-219ENST00000621453 TTC14Q96N46 770 aa33.37■■■□□ 2.93
FMR1-219ENST00000621453 CASTP20810 708 aaKnown RBP33.37■■■□□ 2.93
FMR1-219ENST00000621453 CCDC102BQ68D86 513 aa33.37■■■□□ 2.93
FMR1-219ENST00000621453 MYH7P12883 1935 aa33.36■■■□□ 2.93
FMR1-219ENST00000621453 ADRA2BP18089 450 aa33.36■■■□□ 2.93
FMR1-219ENST00000621453 ADCK5Q3MIX3 580 aa33.36■■■□□ 2.93
FMR1-219ENST00000621453 TPTE2Q6XPS3 522 aa33.36■■■□□ 2.93
FMR1-219ENST00000621453 JAKMIP1Q96N16 626 aaKnown RBP33.36■■■□□ 2.93
FMR1-219ENST00000621453 COL4A1P02462 1669 aa33.36■■■□□ 2.93
FMR1-219ENST00000621453 ARID4AP29374 1257 aaPredicted RBP33.35■■■□□ 2.93
FMR1-219ENST00000621453 CWC22Q9HCG8 908 aaKnown RBP33.35■■■□□ 2.93
FMR1-219ENST00000621453 HMG20BQ9P0W2 317 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms