RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 DEFB115Q30KQ5 88 aa30.72■■■□□ 2.51
ATXN3-252ENST00000620536 DCAF8Q5TAQ9 597 aa30.72■■■□□ 2.51
ATXN3-252ENST00000620536 COL13A1Q5TAT6 717 aaPredicted RBP30.72■■■□□ 2.51
ATXN3-252ENST00000620536 GGA1Q9UJY5 639 aa30.72■■■□□ 2.51
ATXN3-252ENST00000620536 PSMD14O00487 310 aa30.71■■■□□ 2.51
ATXN3-252ENST00000620536 GPR101Q96P66 508 aaPredicted RBP30.71■■■□□ 2.51
ATXN3-252ENST00000620536 CDC5LQ99459 802 aaKnown RBP30.71■■■□□ 2.51
ATXN3-252ENST00000620536 RASSF10A6NK89 507 aa30.7■■■□□ 2.51
ATXN3-252ENST00000620536 VAMP4O75379 141 aa30.7■■■□□ 2.51
ATXN3-252ENST00000620536 EXOSC9Q06265 439 aaKnown RBP30.7■■■□□ 2.51
ATXN3-252ENST00000620536 FKBP5Q13451 457 aaPredicted RBP30.7■■■□□ 2.51
ATXN3-252ENST00000620536 DPF2Q92785 391 aa30.7■■■□□ 2.51
ATXN3-252ENST00000620536 ZBTB12Q9Y330 459 aaPredicted RBP30.7■■■□□ 2.51
ATXN3-252ENST00000620536 TRAF5O00463 557 aa30.69■■■□□ 2.5
ATXN3-252ENST00000620536 FMR1Q06787 632 aaKnown RBP eCLIP30.69■■■□□ 2.5
ATXN3-252ENST00000620536 MICALL2Q8IY33 904 aa30.69■■■□□ 2.5
ATXN3-252ENST00000620536 TTLL11Q8NHH1 800 aa30.69■■■□□ 2.5
ATXN3-252ENST00000620536 ZC3H15Q8WU90 426 aaKnown RBP30.69■■■□□ 2.5
ATXN3-252ENST00000620536 H7C1W4 665 aa30.67■■■□□ 2.5
ATXN3-252ENST00000620536 UBE3BQ7Z3V4 1068 aa30.67■■■□□ 2.5
ATXN3-252ENST00000620536 PGAP2Q9UHJ9 254 aa30.67■■■□□ 2.5
ATXN3-252ENST00000620536 XDHP47989 1333 aa30.67■■■□□ 2.5
ATXN3-252ENST00000620536 RPS12P25398 132 aaKnown RBP30.66■■■□□ 2.5
ATXN3-252ENST00000620536 HIRAP54198 1017 aaPredicted RBP30.66■■■□□ 2.5
ATXN3-252ENST00000620536 GCKRQ14397 625 aa30.66■■■□□ 2.5
ATXN3-252ENST00000620536 TRPM4Q8TD43 1214 aa30.66■■■□□ 2.5
ATXN3-252ENST00000620536 DNAAF4Q8WXU2 420 aa30.66■■■□□ 2.5
ATXN3-252ENST00000620536 MYH16Q9H6N6 1097 aa30.66■■■□□ 2.5
ATXN3-252ENST00000620536 KCNQ5Q9NR82 932 aa30.66■■■□□ 2.5
ATXN3-252ENST00000620536 SHTN1A0MZ66 631 aa30.65■■■□□ 2.5
ATXN3-252ENST00000620536 GREM2Q9H772 168 aa30.65■■■□□ 2.5
ATXN3-252ENST00000620536 ATP2B4P23634 1241 aa30.64■■■□□ 2.5
ATXN3-252ENST00000620536 CST9Q5W186 159 aa30.64■■■□□ 2.5
ATXN3-252ENST00000620536 GLIS2Q9BZE0 524 aaPredicted RBP30.64■■■□□ 2.5
ATXN3-252ENST00000620536 LINS1Q8NG48 757 aa30.63■■■□□ 2.49
ATXN3-252ENST00000620536 AIDAQ96BJ3 306 aa30.63■■■□□ 2.49
ATXN3-252ENST00000620536 BSDC1Q9NW68 430 aaPredicted RBP30.63■■■□□ 2.49
ATXN3-252ENST00000620536 RTL9Q8NET4 1388 aa30.63■■■□□ 2.49
ATXN3-252ENST00000620536 PAXIP1Q6ZW49 1069 aaPredicted RBP30.62■■■□□ 2.49
ATXN3-252ENST00000620536 CDC37L1Q7L3B6 337 aa30.62■■■□□ 2.49
ATXN3-252ENST00000620536 SAMD7Q7Z3H4 446 aa30.62■■■□□ 2.49
ATXN3-252ENST00000620536 SPINK5Q9NQ38 1064 aaPredicted RBP30.62■■■□□ 2.49
ATXN3-252ENST00000620536 WDR33Q9C0J8 1336 aaKnown RBP30.62■■■□□ 2.49
ATXN3-252ENST00000620536 TNS4Q8IZW8 715 aa30.61■■■□□ 2.49
ATXN3-252ENST00000620536 CELF2O95319 508 aaKnown RBP30.6■■■□□ 2.49
ATXN3-252ENST00000620536 VIL1P09327 827 aaKnown RBP30.6■■■□□ 2.49
ATXN3-252ENST00000620536 TBC1D10BQ4KMP7 808 aaPredicted RBP30.6■■■□□ 2.49
ATXN3-252ENST00000620536 PLA2G12BQ9BX93 195 aa30.6■■■□□ 2.49
ATXN3-252ENST00000620536 MINPP1Q9UNW1 487 aa30.6■■■□□ 2.49
ATXN3-252ENST00000620536 IGHMBP2P38935 993 aaKnown RBP30.59■■■□□ 2.49
ATXN3-252ENST00000620536 ECE1P42892 770 aa30.59■■■□□ 2.49
ATXN3-252ENST00000620536 RBM26Q5T8P6 1007 aaKnown RBP30.59■■■□□ 2.49
ATXN3-252ENST00000620536 TLL2Q9Y6L7 1015 aa30.59■■■□□ 2.49
ATXN3-252ENST00000620536 FOXN1O15353 648 aa30.57■■■□□ 2.48
ATXN3-252ENST00000620536 CAPNS2Q96L46 248 aa30.57■■■□□ 2.48
ATXN3-252ENST00000620536 ZNF408Q9H9D4 720 aa30.57■■■□□ 2.48
ATXN3-252ENST00000620536 TRPM7Q96QT4 1865 aa30.57■■■□□ 2.48
ATXN3-252ENST00000620536 MYH3P11055 1940 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 ITGA6P23229 1130 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 CASP7P55210 303 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 GRM1Q13255 1194 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 USP48Q86UV5 1035 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 WBP1LQ9NX94 342 aa30.56■■■□□ 2.48
ATXN3-252ENST00000620536 MAP2K1Q02750 393 aaPredicted RBP30.55■■■□□ 2.48
ATXN3-252ENST00000620536 PODNQ7Z5L7 613 aa30.55■■■□□ 2.48
ATXN3-252ENST00000620536 MPHOSPH8Q99549 860 aa30.55■■■□□ 2.48
ATXN3-252ENST00000620536 CACNA1FO60840 1977 aa30.54■■■□□ 2.48
ATXN3-252ENST00000620536 F6X3S4 739 aa30.54■■■□□ 2.48
ATXN3-252ENST00000620536 EGFRP00533 1210 aa30.54■■■□□ 2.48
ATXN3-252ENST00000620536 CTCFP49711 727 aaPredicted RBP30.54■■■□□ 2.48
ATXN3-252ENST00000620536 CCT4P50991 539 aaKnown RBP30.54■■■□□ 2.48
ATXN3-252ENST00000620536 FAM161AQ3B820 660 aa30.54■■■□□ 2.48
ATXN3-252ENST00000620536 CYP4F22Q6NT55 531 aa30.54■■■□□ 2.48
ATXN3-252ENST00000620536 RSBN1LQ6PCB5 846 aaPredicted RBP30.54■■■□□ 2.48
ATXN3-252ENST00000620536 DCPSQ96C86 337 aaKnown RBP30.54■■■□□ 2.48
ATXN3-252ENST00000620536 CSF1RP07333 972 aa30.53■■■□□ 2.48
ATXN3-252ENST00000620536 KIF4BQ2VIQ3 1234 aa30.53■■■□□ 2.48
ATXN3-252ENST00000620536 SAPCD2Q86UD0 394 aa30.53■■■□□ 2.48
ATXN3-252ENST00000620536 AGBL3Q8NEM8 1001 aa30.53■■■□□ 2.48
ATXN3-252ENST00000620536 MED23Q9ULK4 1368 aa30.53■■■□□ 2.48
ATXN3-252ENST00000620536 USP17L3A6NCW0 530 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 USP17L4A6NCW7 530 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 WTIPA6NIX2 430 aaPredicted RBP30.52■■■□□ 2.48
ATXN3-252ENST00000620536 BEND3Q5T5X7 828 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 USP17L1Q7RTZ2 530 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 KRT26Q7Z3Y9 468 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 ANKRD2Q9GZV1 360 aa30.52■■■□□ 2.48
ATXN3-252ENST00000620536 LEMD3Q9Y2U8 911 aa30.51■■■□□ 2.47
ATXN3-252ENST00000620536 ANKRD18BA2A2Z9 1011 aa30.5■■■□□ 2.47
ATXN3-252ENST00000620536 SCN9AQ15858 1988 aa30.5■■■□□ 2.47
ATXN3-252ENST00000620536 SPEF2Q9C093 1822 aa30.5■■■□□ 2.47
ATXN3-252ENST00000620536 HHIPL1Q96JK4 782 aa30.49■■■□□ 2.47
ATXN3-252ENST00000620536 PRDM10Q9NQV6 1147 aa30.49■■■□□ 2.47
ATXN3-252ENST00000620536 ZNF609O15014 1411 aa30.48■■■□□ 2.47
ATXN3-252ENST00000620536 ZNF280AP59817 542 aaPredicted RBP30.48■■■□□ 2.47
ATXN3-252ENST00000620536 BEGAINQ9BUH8 593 aa30.48■■■□□ 2.47
ATXN3-252ENST00000620536 USP17L8P0C7I0 530 aa30.47■■■□□ 2.47
ATXN3-252ENST00000620536 COA1Q9GZY4 146 aa30.47■■■□□ 2.47
ATXN3-252ENST00000620536 CHMP3Q9Y3E7 222 aa30.47■■■□□ 2.47
ATXN3-252ENST00000620536 ZNF804BA4D1E1 1349 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms