RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 CDC5LQ99459 802 aaKnown RBP9.92□□□□□ -0.82
CPNE3-209ENST00000620393 LRRCC1Q9C099 1032 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 SIL1Q9H173 461 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 RIPOR2Q9Y4F9 1068 aa9.92□□□□□ -0.82
CPNE3-209ENST00000620393 N4BP2Q86UW6 1770 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-209ENST00000620393 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 APBB1O00213 710 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 HOXA10P31260 410 aaPredicted RBP9.91□□□□□ -0.82
CPNE3-209ENST00000620393 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
CPNE3-209ENST00000620393 RPS8P62241 208 aaKnown RBP9.91□□□□□ -0.82
CPNE3-209ENST00000620393 LRRC24Q50LG9 513 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 PUS3Q9BZE2 481 aaKnown RBP9.91□□□□□ -0.82
CPNE3-209ENST00000620393 LNPKQ9C0E8 428 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
CPNE3-209ENST00000620393 SMARCA5O60264 1052 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 POLD1P28340 1107 aa9.9□□□□□ -0.82
CPNE3-209ENST00000620393 ANKRD18AQ8IVF6 992 aa9.9□□□□□ -0.82
CPNE3-209ENST00000620393 C16orf71Q8IYS4 520 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 CELF1Q92879 486 aaKnown RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 RBM17Q96I25 401 aaKnown RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 CRAMP1Q96RY5 1269 aa9.9□□□□□ -0.82
CPNE3-209ENST00000620393 CNNM1Q9NRU3 951 aa9.9□□□□□ -0.82
CPNE3-209ENST00000620393 BSDC1Q9NW68 430 aaPredicted RBP9.9□□□□□ -0.82
CPNE3-209ENST00000620393 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
CPNE3-209ENST00000620393 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.83
CPNE3-209ENST00000620393 H0YIN7 160 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 BBOX1O75936 387 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 SRGNP10124 158 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 PDE4AP27815 886 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 TFCP2Q12800 502 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 GRAPQ13588 217 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 CLASRPQ8N2M8 674 aaKnown RBP9.89□□□□□ -0.83
CPNE3-209ENST00000620393 GRAPLQ8TC17 118 aaPredicted RBP9.89□□□□□ -0.83
CPNE3-209ENST00000620393 SGIP1Q9BQI5 828 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 GPR108Q9NPR9 543 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
CPNE3-209ENST00000620393 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 NPR1P16066 1061 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 ALDH1B1P30837 517 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 NUBP1P53384 320 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 METTL24Q5JXM2 366 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 EAF2Q96CJ1 260 aaPredicted RBP9.88□□□□□ -0.83
CPNE3-209ENST00000620393 MASTLQ96GX5 879 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 MINPP1Q9UNW1 487 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
CPNE3-209ENST00000620393 ANKRD36CQ5JPF3 1778 aa9.88□□□□□ -0.83
CPNE3-209ENST00000620393 AFDNP55196 1824 aaKnown RBP9.87□□□□□ -0.83
CPNE3-209ENST00000620393 PDE8BO95263 885 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 PTGER2P43116 358 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 RGS3P49796 1198 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 TNNI3KQ59H18 835 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 STYK1Q6J9G0 422 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 TMC4Q7Z404 712 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 BCL11AQ9H165 835 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 AKAP2Q9Y2D5 859 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 FPGT-TNNI3KV9GXZ4 949 aa9.87□□□□□ -0.83
CPNE3-209ENST00000620393 IFIT2P09913 472 aaKnown RBP9.86□□□□□ -0.83
CPNE3-209ENST00000620393 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-209ENST00000620393 TGFB2P61812 414 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 TIMM10P62072 90 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 CHRNDQ07001 517 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 AACSQ86V21 672 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 SP8Q8IXZ3 490 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 VGLL2Q8N8G2 317 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 OTUD7AQ8TE49 926 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-209ENST00000620393 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPNE3-209ENST00000620393 KIF12Q96FN5 646 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 ANKRD2Q9GZV1 360 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 CCDC8Q9H0W5 538 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-209ENST00000620393 SPON1Q9HCB6 807 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
CPNE3-209ENST00000620393 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 TUBGCP6Q96RT7 1819 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 SOCS7O14512 581 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 CHRNA5P30532 468 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 PDE1AP54750 535 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-209ENST00000620393 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 NEUROD6Q96NK8 337 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
CPNE3-209ENST00000620393 SALL3Q9BXA9 1300 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 A0A0G2JLW4 131 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 A0A1B0GUL7 405 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 TAF5LO75529 589 aa9.84□□□□□ -0.83
CPNE3-209ENST00000620393 DPEP1P16444 411 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms