RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.06
SKP2-209ENST00000620197 STOX1Q6ZVD7 989 aa15.46■□□□□ 0.06
SKP2-209ENST00000620197 SPC24Q8NBT2 197 aa15.46■□□□□ 0.06
SKP2-209ENST00000620197 MRFAP1L1Q96HT8 127 aa15.46■□□□□ 0.06
SKP2-209ENST00000620197 HAUS7Q99871 368 aa15.46■□□□□ 0.06
SKP2-209ENST00000620197 METTL22Q9BUU2 404 aaPredicted RBP15.46■□□□□ 0.06
SKP2-209ENST00000620197 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 CYP21A2P08686 494 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 CCDC186Q7Z3E2 898 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 TCEANC2Q96MN5 208 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
SKP2-209ENST00000620197 SCRN1Q12765 414 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 NYAP1Q6ZVC0 841 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
SKP2-209ENST00000620197 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
SKP2-209ENST00000620197 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
SKP2-209ENST00000620197 SHANK3Q9BYB0 1731 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
SKP2-209ENST00000620197 PPP4R3BQ5MIZ7 849 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 FAM53CQ9NYF3 392 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 GCP02774 474 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 EVCP57679 992 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 DHX40Q8IX18 779 aaKnown RBP15.44■□□□□ 0.06
SKP2-209ENST00000620197 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
SKP2-209ENST00000620197 NEK1Q96PY6 1258 aa15.44■□□□□ 0.06
SKP2-209ENST00000620197 MEGF6O75095 1541 aa15.43■□□□□ 0.06
SKP2-209ENST00000620197 BRF1Q92994 677 aa15.43■□□□□ 0.06
SKP2-209ENST00000620197 GOLPH3LQ9H4A5 285 aa15.43■□□□□ 0.06
SKP2-209ENST00000620197 TFIP11Q9UBB9 837 aaKnown RBP15.43■□□□□ 0.06
SKP2-209ENST00000620197 ZHX1Q9UKY1 873 aaPredicted RBP15.43■□□□□ 0.06
SKP2-209ENST00000620197 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
SKP2-209ENST00000620197 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
SKP2-209ENST00000620197 EDC3Q96F86 508 aaKnown RBP15.43■□□□□ 0.06
SKP2-209ENST00000620197 C1orf141Q5JVX7 400 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 ZNF790Q6PG37 636 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 ANKRD24Q8TF21 1146 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
SKP2-209ENST00000620197 ERBB3P21860 1342 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 ZNF165P49910 485 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 CBX1P83916 185 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 Q6ZUG5 572 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
SKP2-209ENST00000620197 CHGBP05060 677 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 LRRC8AQ8IWT6 810 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 DNAJC25Q9H1X3 360 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
SKP2-209ENST00000620197 PDCL2Q8N4E4 241 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 FEZ1Q99689 392 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 SLC52A2Q9HAB3 445 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 CTNNA3Q9UI47 895 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 CFAP45Q9UL16 551 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 CTAGE5O15320 804 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 CCZ1BP86790 482 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 CCZ1P86791 482 aaPredicted RBP15.41■□□□□ 0.06
SKP2-209ENST00000620197 MCMDC2Q4G0Z9 681 aa15.41■□□□□ 0.06
SKP2-209ENST00000620197 TFCP2Q12800 502 aa15.4■□□□□ 0.06
SKP2-209ENST00000620197 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
SKP2-209ENST00000620197 DSCC1Q9BVC3 393 aa15.4■□□□□ 0.06
SKP2-209ENST00000620197 CLIP2Q9UDT6 1046 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 KCPQ6ZWJ8 1503 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 NEMFO60524 1076 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
SKP2-209ENST00000620197 KCNJ4P48050 445 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
SKP2-209ENST00000620197 BPIFA3Q9BQP9 254 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 SIL1Q9H173 461 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 AKAP11Q9UKA4 1901 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 SEC62Q99442 399 aaKnown RBP15.39■□□□□ 0.05
SKP2-209ENST00000620197 GPR108Q9NPR9 543 aa15.39■□□□□ 0.05
SKP2-209ENST00000620197 STK3Q13188 491 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 STX1AQ16623 288 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 CCDC129Q6ZRS4 1044 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
SKP2-209ENST00000620197 COL22A1Q8NFW1 1626 aaPredicted RBP15.38■□□□□ 0.05
SKP2-209ENST00000620197 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
SKP2-209ENST00000620197 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 HELLSQ9NRZ9 838 aa15.38■□□□□ 0.05
SKP2-209ENST00000620197 FOXO4P98177 505 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 FMR1NBQ8N0W7 255 aaPredicted RBP15.37■□□□□ 0.05
SKP2-209ENST00000620197 TRIM5Q9C035 493 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 FOXP2O15409 715 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 DDX11Q96FC9 970 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 OSBPL5Q9H0X9 879 aaPredicted RBP15.37■□□□□ 0.05
SKP2-209ENST00000620197 CHMP3Q9Y3E7 222 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 PHKG2P15735 406 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
SKP2-209ENST00000620197 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
SKP2-209ENST00000620197 USP16Q9Y5T5 823 aa15.37■□□□□ 0.05
SKP2-209ENST00000620197 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms