RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 FERMT3Q86UX7 667 aa35.64■■■■□ 3.3
KHSRP-213ENST00000619396 PIGBQ92521 554 aa35.64■■■■□ 3.3
KHSRP-213ENST00000619396 RFX7Q2KHR2 1363 aa35.63■■■■□ 3.29
KHSRP-213ENST00000619396 FAM173BQ6P4H8 233 aa35.63■■■■□ 3.29
KHSRP-213ENST00000619396 ZNF830Q96NB3 372 aaPredicted RBP35.63■■■■□ 3.29
KHSRP-213ENST00000619396 MPNDQ8N594 471 aa35.62■■■■□ 3.29
KHSRP-213ENST00000619396 ZNF594Q96JF6 807 aaPredicted RBP35.62■■■■□ 3.29
KHSRP-213ENST00000619396 UQCRHLA0A096LP55 91 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 UQCRHP07919 91 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 DNAJC10Q8IXB1 793 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 AP5Z1O43299 807 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 KRT32Q14532 448 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 SASS6Q6UVJ0 657 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 ATG9AQ7Z3C6 839 aa35.61■■■■□ 3.29
KHSRP-213ENST00000619396 PIBF1Q8WXW3 757 aa35.6■■■■□ 3.29
KHSRP-213ENST00000619396 DNAJC2Q99543 621 aaKnown RBP35.6■■■■□ 3.29
KHSRP-213ENST00000619396 PDCL3Q9H2J4 239 aa35.6■■■■□ 3.29
KHSRP-213ENST00000619396 KAT6BQ8WYB5 2073 aa35.6■■■■□ 3.29
KHSRP-213ENST00000619396 ZNF609O15014 1411 aa35.59■■■■□ 3.29
KHSRP-213ENST00000619396 CCDC191Q8NCU4 936 aa35.59■■■■□ 3.29
KHSRP-213ENST00000619396 LIG1P18858 919 aa35.59■■■■□ 3.29
KHSRP-213ENST00000619396 CCDC192P0DO97 292 aa35.58■■■■□ 3.29
KHSRP-213ENST00000619396 HAUS7Q99871 368 aa35.58■■■■□ 3.29
KHSRP-213ENST00000619396 STK3Q13188 491 aa35.57■■■■□ 3.29
KHSRP-213ENST00000619396 LRRC24Q50LG9 513 aa35.57■■■■□ 3.29
KHSRP-213ENST00000619396 NEK1Q96PY6 1258 aa35.57■■■■□ 3.29
KHSRP-213ENST00000619396 TTC12Q9H892 705 aaPredicted RBP35.57■■■■□ 3.29
KHSRP-213ENST00000619396 ATG3Q9NT62 314 aa35.57■■■■□ 3.29
KHSRP-213ENST00000619396 SCAND2PQ9GZW5 306 aaPredicted RBP35.56■■■■□ 3.28
KHSRP-213ENST00000619396 U3KPZ7 1027 aaPredicted RBP35.56■■■■□ 3.28
KHSRP-213ENST00000619396 GTF3C6Q969F1 213 aa35.56■■■■□ 3.28
KHSRP-213ENST00000619396 TIMM10P62072 90 aa35.55■■■■□ 3.28
KHSRP-213ENST00000619396 NEUROD6Q96NK8 337 aa35.55■■■■□ 3.28
KHSRP-213ENST00000619396 ITGB4P16144 1822 aa35.55■■■■□ 3.28
KHSRP-213ENST00000619396 CCDC129Q6ZRS4 1044 aa35.55■■■■□ 3.28
KHSRP-213ENST00000619396 DDX46Q7L014 1031 aaKnown RBP35.55■■■■□ 3.28
KHSRP-213ENST00000619396 SEC62Q99442 399 aaKnown RBP35.55■■■■□ 3.28
KHSRP-213ENST00000619396 MCMDC2Q4G0Z9 681 aa35.54■■■■□ 3.28
KHSRP-213ENST00000619396 NUP62CLQ9H1M0 184 aa35.54■■■■□ 3.28
KHSRP-213ENST00000619396 NOLC1Q14978 699 aaKnown RBP eCLIP35.53■■■■□ 3.28
KHSRP-213ENST00000619396 PUS3Q9BZE2 481 aaKnown RBP35.53■■■■□ 3.28
KHSRP-213ENST00000619396 MAP3K11Q16584 847 aa35.53■■■■□ 3.28
KHSRP-213ENST00000619396 LEO1Q8WVC0 666 aaPredicted RBP35.53■■■■□ 3.28
KHSRP-213ENST00000619396 ISCA1Q9BUE6 129 aa35.53■■■■□ 3.28
KHSRP-213ENST00000619396 TFIP11Q9UBB9 837 aaKnown RBP35.53■■■■□ 3.28
KHSRP-213ENST00000619396 CYP21A2P08686 494 aa35.52■■■■□ 3.28
KHSRP-213ENST00000619396 DYNC1I1O14576 645 aa35.52■■■■□ 3.28
KHSRP-213ENST00000619396 JAK2O60674 1132 aa35.52■■■■□ 3.28
KHSRP-213ENST00000619396 RBM10P98175 930 aaKnown RBP35.52■■■■□ 3.28
KHSRP-213ENST00000619396 SPATA32Q96LK8 384 aa35.52■■■■□ 3.28
KHSRP-213ENST00000619396 CCDC85AQ96PX6 553 aaPredicted RBP35.52■■■■□ 3.28
KHSRP-213ENST00000619396 TCIRG1Q13488 830 aa35.51■■■■□ 3.28
KHSRP-213ENST00000619396 SLFNL1Q499Z3 407 aa35.51■■■■□ 3.28
KHSRP-213ENST00000619396 Q6ZUG5 572 aa35.51■■■■□ 3.27
KHSRP-213ENST00000619396 MRVI1Q9Y6F6 885 aa35.51■■■■□ 3.27
KHSRP-213ENST00000619396 SPTLC3Q9NUV7 552 aa35.5■■■■□ 3.27
KHSRP-213ENST00000619396 GLIPR1L2Q4G1C9 344 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 FAM200AQ8TCP9 573 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 CAMK4Q16566 473 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 KBTBD3Q8NAB2 608 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 FAM89AQ96GI7 184 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 SLC4A9Q96Q91 983 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 DACT1Q9NYF0 836 aa35.49■■■■□ 3.27
KHSRP-213ENST00000619396 TYRO3Q06418 890 aa35.48■■■■□ 3.27
KHSRP-213ENST00000619396 RESTQ13127 1097 aa35.48■■■■□ 3.27
KHSRP-213ENST00000619396 EYA2O00167 538 aa35.48■■■■□ 3.27
KHSRP-213ENST00000619396 PLCB2Q00722 1185 aa35.48■■■■□ 3.27
KHSRP-213ENST00000619396 RBM43Q6ZSC3 357 aaKnown RBP35.48■■■■□ 3.27
KHSRP-213ENST00000619396 SYNE4Q8N205 404 aa35.48■■■■□ 3.27
KHSRP-213ENST00000619396 SH3TC1Q8TE82 1336 aa35.47■■■■□ 3.27
KHSRP-213ENST00000619396 DISP2A7MBM2 1401 aa35.47■■■■□ 3.27
KHSRP-213ENST00000619396 IL15P40933 162 aaPredicted RBP35.47■■■■□ 3.27
KHSRP-213ENST00000619396 DDX19AQ9NUU7 478 aaKnown RBP35.47■■■■□ 3.27
KHSRP-213ENST00000619396 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.46■■■■□ 3.27
KHSRP-213ENST00000619396 BRF1Q92994 677 aa35.46■■■■□ 3.27
KHSRP-213ENST00000619396 STOX1Q6ZVD7 989 aa35.45■■■■□ 3.27
KHSRP-213ENST00000619396 C17orf53Q8N3J3 647 aaPredicted RBP35.45■■■■□ 3.27
KHSRP-213ENST00000619396 SYTL4Q96C24 671 aaPredicted RBP35.45■■■■□ 3.27
KHSRP-213ENST00000619396 PGBD1Q96JS3 809 aa35.45■■■■□ 3.27
KHSRP-213ENST00000619396 TNMDQ9H2S6 317 aa35.45■■■■□ 3.27
KHSRP-213ENST00000619396 HLFQ16534 295 aa35.45■■■■□ 3.27
KHSRP-213ENST00000619396 ROBO1Q9Y6N7 1651 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 GOLGA6L4A6NEF3 574 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 GOLIM4O00461 696 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 KIF6Q6ZMV9 814 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 VSIG10Q8N0Z9 540 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 CLSTN2Q9H4D0 955 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 FAM13BQ9NYF5 915 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 PALLDQ8WX93 1383 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 SMARCC2Q8TAQ2 1214 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 KCNF1Q9H3M0 494 aa35.44■■■■□ 3.26
KHSRP-213ENST00000619396 COL14A1Q05707 1796 aaKnown RBP35.43■■■■□ 3.26
KHSRP-213ENST00000619396 STARD3NLO95772 234 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 TPM3P06753 285 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 SCRN1Q12765 414 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 GPTP24298 496 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 CKAP2LQ8IYA6 745 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 TEX13AQ9BXU3 409 aaPredicted RBP35.42■■■■□ 3.26
KHSRP-213ENST00000619396 GPR108Q9NPR9 543 aa35.42■■■■□ 3.26
KHSRP-213ENST00000619396 A0A1B0GUL7 405 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms