RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 RGMBQ6NW40 437 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 HHIPL1Q96JK4 782 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
SYN3-213ENST00000619146 ASTN2O75129 1339 aaPredicted RBP11.8□□□□□ -0.52
SYN3-213ENST00000619146 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
SYN3-213ENST00000619146 PSMD14O00487 310 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 RTFDC1Q9BY42 306 aaPredicted RBP11.79□□□□□ -0.52
SYN3-213ENST00000619146 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 GBA2Q9HCG7 927 aaPredicted RBP11.79□□□□□ -0.52
SYN3-213ENST00000619146 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 SCAF8Q9UPN6 1271 aaKnown RBP11.79□□□□□ -0.52
SYN3-213ENST00000619146 MYH3P11055 1940 aa11.79□□□□□ -0.52
SYN3-213ENST00000619146 EXOSC9Q06265 439 aaKnown RBP11.78□□□□□ -0.52
SYN3-213ENST00000619146 DDX46Q7L014 1031 aaKnown RBP11.78□□□□□ -0.52
SYN3-213ENST00000619146 C2orf69Q8N8R5 385 aa11.78□□□□□ -0.52
SYN3-213ENST00000619146 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
SYN3-213ENST00000619146 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
SYN3-213ENST00000619146 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
SYN3-213ENST00000619146 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
SYN3-213ENST00000619146 PARP10Q53GL7 1025 aa11.77□□□□□ -0.53
SYN3-213ENST00000619146 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
SYN3-213ENST00000619146 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
SYN3-213ENST00000619146 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
SYN3-213ENST00000619146 PAPPA2Q9BXP8 1791 aa11.77□□□□□ -0.53
SYN3-213ENST00000619146 CENPFP49454 3210 aa11.77□□□□□ -0.53
SYN3-213ENST00000619146 BBOX1O75936 387 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 HOXB7P09629 217 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 GRAPQ13588 217 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 PDIA6Q15084 440 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 TWISTNBQ3B726 338 aaPredicted RBP11.76□□□□□ -0.53
SYN3-213ENST00000619146 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 NLRP10Q86W26 655 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
SYN3-213ENST00000619146 DCPSQ96C86 337 aaKnown RBP11.76□□□□□ -0.53
SYN3-213ENST00000619146 VPS33BQ9H267 617 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
SYN3-213ENST00000619146 ECE2O60344 883 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 VAMP4O75379 141 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 MOB2Q70IA6 237 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
SYN3-213ENST00000619146 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 GGA3Q9NZ52 723 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
SYN3-213ENST00000619146 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 CEP290O15078 2479 aa11.75□□□□□ -0.53
SYN3-213ENST00000619146 RARSP54136 660 aaKnown RBP11.74□□□□□ -0.53
SYN3-213ENST00000619146 GPSM2P81274 684 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
SYN3-213ENST00000619146 KRT24Q2M2I5 525 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 KIF4BQ2VIQ3 1234 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 CDCA5Q96FF9 252 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
SYN3-213ENST00000619146 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
SYN3-213ENST00000619146 ATP5J2-PTCD1G3V325 749 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 SLC10A3P09131 477 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
SYN3-213ENST00000619146 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
SYN3-213ENST00000619146 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
SYN3-213ENST00000619146 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
SYN3-213ENST00000619146 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
SYN3-213ENST00000619146 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
SYN3-213ENST00000619146 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 DPF2Q92785 391 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 SAGE1Q9NXZ1 904 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
SYN3-213ENST00000619146 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
SYN3-213ENST00000619146 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
SYN3-213ENST00000619146 G3V3G9 751 aa11.71□□□□□ -0.53
SYN3-213ENST00000619146 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
SYN3-213ENST00000619146 HTTP42858 3142 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 UBE2Q2LH0YL09 131 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
SYN3-213ENST00000619146 NEFLP07196 543 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 SCARF1Q14162 830 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms