RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 HAUS7Q99871 368 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 HIP1O00291 1037 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 XAGE2Q96GT9 111 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 MPHOSPH8Q99549 860 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
TNFAIP3-209ENST00000619035 PLSCR1O15162 318 aa15.35■□□□□ 0.05
TNFAIP3-209ENST00000619035 GOLIM4O00461 696 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 HELBQ8NG08 1087 aaPredicted RBP15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 PALD1Q9ULE6 856 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 NPHP1O15259 732 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 RAD50Q92878 1312 aa15.34■□□□□ 0.05
TNFAIP3-209ENST00000619035 A0A0D9SFI3 127 aa15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 K7ELQ4 463 aaPredicted RBP15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 LSG1Q9H089 658 aaKnown RBP15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.05
TNFAIP3-209ENST00000619035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 IGHMBP2P38935 993 aaKnown RBP15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
TNFAIP3-209ENST00000619035 PDE8BO95263 885 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 SSFA2P28290 1259 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 LRP5O75197 1615 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 CHGBP05060 677 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
TNFAIP3-209ENST00000619035 TAF5LO75529 589 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 PTH1RQ03431 593 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 RGPD3A6NKT7 1758 aaPredicted RBP15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 RGPD4Q7Z3J3 1758 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 ST18O60284 1047 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 HSPA4P34932 840 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 DDIT3P35638 169 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 SF3B3Q15393 1217 aaKnown RBP15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 TXNRD1Q16881 649 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
TNFAIP3-209ENST00000619035 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
TNFAIP3-209ENST00000619035 CDC5LQ99459 802 aaKnown RBP15.3■□□□□ 0.04
TNFAIP3-209ENST00000619035 SNAP23O00161 211 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 APBA3O96018 575 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 KCNJ4P48050 445 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 NEK4P51957 841 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 ANAPC15P60006 121 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 SCARF1Q14162 830 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 CCDC171Q6TFL3 1326 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 RFX7Q2KHR2 1363 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 ANKRD18AQ8IVF6 992 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 IL27Q8NEV9 243 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 NLRP3Q96P20 1036 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 COL4A1P02462 1669 aa15.29■□□□□ 0.04
TNFAIP3-209ENST00000619035 NFIXQ14938 502 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 SLFNL1Q499Z3 407 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 PROM2Q8N271 834 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 LPIN2Q92539 896 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 SLC5A1P13866 664 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 ZAP70P43403 619 aa15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 PRPF40BQ6NWY9 871 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-209ENST00000619035 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
TNFAIP3-209ENST00000619035 CHRNDQ07001 517 aa15.27■□□□□ 0.04
TNFAIP3-209ENST00000619035 CCDC129Q6ZRS4 1044 aa15.27■□□□□ 0.04
TNFAIP3-209ENST00000619035 SNX14Q9Y5W7 946 aa15.27■□□□□ 0.04
TNFAIP3-209ENST00000619035 MCAMP43121 646 aa15.27■□□□□ 0.03
TNFAIP3-209ENST00000619035 PHKA1P46020 1223 aa15.27■□□□□ 0.03
TNFAIP3-209ENST00000619035 CCDC102BQ68D86 513 aa15.27■□□□□ 0.03
TNFAIP3-209ENST00000619035 RASEFQ8IZ41 740 aa15.27■□□□□ 0.03
TNFAIP3-209ENST00000619035 RBM8AQ9Y5S9 174 aaKnown RBP15.27■□□□□ 0.03
TNFAIP3-209ENST00000619035 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 FGFR2P21802 821 aa15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 GSE1Q14687 1217 aa15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 NOL8Q76FK4 1167 aaKnown RBP15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
TNFAIP3-209ENST00000619035 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms