RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 RRAGBQ5VZM2 374 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 GBP5Q96PP8 586 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IDEP14735 1019 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CCDC42Q96M95 316 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 USP5P45974 858 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TPD52P55327 224 aaPredicted RBP18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 FERMT1Q9BQL6 677 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 KCNK9Q9NPC2 374 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NKIRAS1Q9NYS0 192 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 A0A087WZG4 1122 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ZNF213O14771 459 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PRC1O43663 620 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IFNKQ9P0W0 207 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ATP5DP30049 168 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NCAPGQ9BPX3 1015 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 UTP14AQ9BVJ6 771 aaKnown RBP18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 WDHD1O75717 1129 aaPredicted RBP18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 BMP15O95972 392 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 KRT13P13646 458 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NLRP5P59047 1200 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 DNM1Q05193 864 aaKnown RBP18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NEK1Q96PY6 1258 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NAPBQ9H115 298 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ERCC3P19447 782 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 HDAC1Q13547 482 aaPredicted RBP18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
CNTNAP3B-214ENST00000618777 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LUC7L3O95232 432 aaKnown RBP18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LRP2BPQ9P2M1 347 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LRRC9Q6ZRR7 1453 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 FRMD3A2A2Y4 597 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TRIM27P14373 513 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 FAM160A1Q05DH4 1040 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IRAK4Q9NWZ3 460 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SMIM24O75264 130 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SPATS2Q86XZ4 545 aaKnown RBP18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ZNF287Q9HBT7 754 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TPX2Q9ULW0 747 aaKnown RBP18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 USH1CQ9Y6N9 552 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CETN3O15182 167 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 DIXDC1Q155Q3 683 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PHLDB2Q86SQ0 1253 aa18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 BAG1Q99933 345 aaPredicted RBP18.6■□□□□ 0.57
CNTNAP3B-214ENST00000618777 A0A087WUV0 522 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 HPDP32754 393 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CNGA4Q8IV77 575 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LRRD1A4D1F6 860 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ZWINTO95229 277 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CARD6Q9BX69 1037 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SMIM23A6NLE4 172 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IRX5P78411 483 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TNIP1Q15025 636 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 RNF41Q9H4P4 317 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 EXOC1Q9NV70 894 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PSMC4P43686 418 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NUCB1Q02818 461 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IQCA1Q86XH1 822 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TBC1D5Q92609 795 aa18.59■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PSMA7O14818 248 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 STXBP4Q6ZWJ1 553 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 WHAMMQ8TF30 809 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 RIPOR2Q9Y4F9 1068 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 HNRNPH2P55795 449 aaKnown RBP18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CCDC82Q8N4S0 544 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 UBLCP1Q8WVY7 318 aaPredicted RBP18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 N4BP2L2Q92802 583 aaPredicted RBP18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 MRFAP1Q9Y605 127 aa18.58■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 ARHGAP24Q8N264 748 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 ECHDC1Q9NTX5 307 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 RUFY4Q6ZNE9 571 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 NAPGQ99747 312 aaPredicted RBP18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 TSGA10Q9BZW7 698 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 COMMD10Q9Y6G5 202 aa18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 RNF10Q8N5U6 811 aaKnown RBP18.58■□□□□ 0.56
CNTNAP3B-214ENST00000618777 GOLGA6BA6NDN3 693 aa18.57■□□□□ 0.56
CNTNAP3B-214ENST00000618777 CROCCP2Q86T23 111 aa18.57■□□□□ 0.56
CNTNAP3B-214ENST00000618777 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
CNTNAP3B-214ENST00000618777 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
CNTNAP3B-214ENST00000618777 INTS4Q96HW7 963 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms