RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 MPHOSPH8Q99549 860 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC50Q8IVM0 306 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 TBC1D31Q96DN5 1066 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
PDE6A-205ENST00000617647 LZTFL1Q9NQ48 299 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 BAIAP2L1Q9UHR4 511 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 CFAP45Q9UL16 551 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 RIPOR2Q9Y4F9 1068 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 ADGRL2O95490 1459 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 KDM5CP41229 1560 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-205ENST00000617647 MCM3P25205 808 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 LMOD1P29536 600 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-205ENST00000617647 OTUD7AQ8TE49 926 aaPredicted RBP8.47□□□□□ -1.05
PDE6A-205ENST00000617647 FAM210AQ96ND0 272 aa8.47□□□□□ -1.05
PDE6A-205ENST00000617647 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.05
PDE6A-205ENST00000617647 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.05
PDE6A-205ENST00000617647 JPH4Q96JJ6 628 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 CLSTN2Q9H4D0 955 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 CRYMQ14894 314 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 LRRC31Q6UY01 552 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 NYAP1Q6ZVC0 841 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 NECAB1Q8N987 351 aa8.46□□□□□ -1.05
PDE6A-205ENST00000617647 ZSCAN31Q96LW9 406 aaPredicted RBP8.46□□□□□ -1.05
PDE6A-205ENST00000617647 HOOK1Q9UJC3 728 aaKnown RBP8.46□□□□□ -1.05
PDE6A-205ENST00000617647 TTC41PQ6P2S7 1318 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 H3BQF6 201 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 RGL2O15211 777 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 TADA3O75528 432 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 CCAR1Q8IX12 1150 aaKnown RBP8.46□□□□□ -1.06
PDE6A-205ENST00000617647 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
PDE6A-205ENST00000617647 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 PHLPP2Q6ZVD8 1323 aa8.46□□□□□ -1.06
PDE6A-205ENST00000617647 SASH3O75995 380 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 CDC25BP30305 580 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 CAPS2Q9BXY5 557 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 C9orf84Q5VXU9 1444 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 MYO1FO00160 1098 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 NEFHP12036 1026 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 UBASH3AP57075 661 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 STIM1Q13586 685 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 ARMC3Q5W041 872 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 PPFIBP1Q86W92 1011 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 ESYT1Q9BSJ8 1104 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 IMPACTQ9P2X3 320 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 N4BP1O75113 896 aaKnown RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 SNUPNO95149 360 aaKnown RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 PDCD2Q16342 344 aaPredicted RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 LRRC23Q53EV4 343 aaPredicted RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 ITFG2Q969R8 447 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 SLC8A1P32418 973 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 AK2P54819 239 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 CASP8Q14790 479 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 FSIP1Q8NA03 581 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 IQUBQ8NA54 791 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 XPO4Q9C0E2 1151 aaKnown RBP8.45□□□□□ -1.06
PDE6A-205ENST00000617647 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
PDE6A-205ENST00000617647 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 SMIM24O75264 130 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 ZRANB2O95218 330 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDE6A-205ENST00000617647 ZNF569Q5MCW4 686 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 CPLX3Q8WVH0 158 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 CCDC141Q6ZP82 1450 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 KDM5DQ9BY66 1539 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 EPB41L2O43491 1005 aaKnown RBP8.44□□□□□ -1.06
PDE6A-205ENST00000617647 HSP90AA4PQ58FG1 418 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 REXO1L1PQ8IX06 675 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 CTAGE9A4FU28 777 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 KIF5BP33176 963 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 PPARDQ03181 441 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 TRIM4Q9C037 500 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 CHCHD3Q9NX63 227 aaKnown RBP8.44□□□□□ -1.06
PDE6A-205ENST00000617647 PALD1Q9ULE6 856 aa8.44□□□□□ -1.06
PDE6A-205ENST00000617647 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 CUL4AQ13619 759 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 STK38Q15208 465 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 CCDC40Q4G0X9 1142 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 SPECC1Q5M775 1068 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 CAPRIN2Q6IMN6 1127 aaKnown RBP8.43□□□□□ -1.06
PDE6A-205ENST00000617647 TTC6Q86TZ1 520 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 ZNF396Q96N95 335 aaPredicted RBP8.43□□□□□ -1.06
PDE6A-205ENST00000617647 FUT8Q9BYC5 575 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 KLC4Q9NSK0 619 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 A0A087WWV3 80 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 OPA1O60313 960 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 NR1I2O75469 434 aa8.43□□□□□ -1.06
PDE6A-205ENST00000617647 EIF2S2P20042 333 aaKnown RBP8.43□□□□□ -1.06
PDE6A-205ENST00000617647 PNMA8AQ86V59 439 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms