RNA–Protein interactions for RNA: ENST00000617311.1

NPIPB12-209, Transcript of nuclear pore complex interacting protein family, member B12, human

TSL 1 (best) BASIC

Gene NPIPB12, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB12-209	ENST00000617311	ECE2	O60344	883 aa		13.92	□□□□□ -0.18
NPIPB12-209	ENST00000617311	ITGBL1	O95965	494 aa	Predicted RBP	13.92	□□□□□ -0.18
NPIPB12-209	ENST00000617311	TTLL11	Q8NHH1	800 aa		13.92	□□□□□ -0.18
NPIPB12-209	ENST00000617311	MPHOSPH8	Q99549	860 aa		13.92	□□□□□ -0.18
NPIPB12-209	ENST00000617311	CNOT7	Q9UIV1	285 aa	Known RBP	13.92	□□□□□ -0.18
NPIPB12-209	ENST00000617311	COL4A5	P29400	1685 aa		13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	LAMB2	P55268	1798 aa		13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	MICALL2	Q8IY33	904 aa		13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	ZC3H15	Q8WU90	426 aa	Known RBP	13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	DPF2	Q92785	391 aa		13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	GREM2	Q9H772	168 aa		13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	BSDC1	Q9NW68	430 aa	Predicted RBP	13.91	□□□□□ -0.18
NPIPB12-209	ENST00000617311	DDX60	Q8IY21	1712 aa	Known RBP	13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	YDJC	A8MPS7	323 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311		E9PSI1	815 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	PSMD14	O00487	310 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	KCNJ4	P48050	445 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	SLC4A10	Q6U841	1118 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	AIDA	Q96BJ3	306 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	ANKRD2	Q9GZV1	360 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	CHMP3	Q9Y3E7	222 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	RTL9	Q8NET4	1388 aa		13.9	□□□□□ -0.18
NPIPB12-209	ENST00000617311	CNTNAP1	P78357	1384 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ANKRD18B	A2A2Z9	1011 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ITGA6	P23229	1130 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	DEFB115	Q30KQ5	88 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	TAF7L	Q5H9L4	462 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	GPR101	Q96P66	508 aa	Predicted RBP	13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	PLA2G12B	Q9BX93	195 aa		13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.89	□□□□□ -0.19
NPIPB12-209	ENST00000617311		F6X3S4	739 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	HSPA1A	P0DMV8	641 aa	Known RBP	13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	HSPA1B	P0DMV9	641 aa	Known RBP	13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ECE1	P42892	770 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	IFIT5	Q13325	482 aa	Known RBP	13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CDC37L1	Q7L3B6	337 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	PODN	Q7Z5L7	613 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	DCPS	Q96C86	337 aa	Known RBP	13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	SRCIN1	Q9C0H9	1055 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	LEMD3	Q9Y2U8	911 aa		13.88	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CCDC57	Q2TAC2	916 aa		13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	FAM161A	Q3B820	660 aa		13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	RBM26	Q5T8P6	1007 aa	Known RBP	13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ZNF408	Q9H9D4	720 aa		13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	MINPP1	Q9UNW1	487 aa		13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	LRRC37A	A6NMS7	1700 aa		13.87	□□□□□ -0.19
NPIPB12-209	ENST00000617311	RASSF10	A6NK89	507 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CCER2	I3L3R5	266 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	GRM8	O00222	908 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ALDH1L1	O75891	902 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	VIL1	P09327	827 aa	Known RBP	13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CCT4	P50991	539 aa	Known RBP	13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	BEND3	Q5T5X7	828 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	AGBL3	Q8NEM8	1001 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	FBXW7	Q969H0	707 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	DUOX1	Q9NRD9	1551 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CEP350	Q5VT06	3117 aa		13.86	□□□□□ -0.19
NPIPB12-209	ENST00000617311	MED23	Q9ULK4	1368 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	USP17L3	A6NCW0	530 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	USP17L4	A6NCW7	530 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	TRAF5	O00463	557 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CELF2	O95319	508 aa	Known RBP	13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	CSF1R	P07333	972 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	VEGFB	P49765	207 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	GRM1	Q13255	1194 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	KIF4B	Q2VIQ3	1234 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	IFFO2	Q5TF58	517 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	USP17L1	Q7RTZ2	530 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	SAMD7	Q7Z3H4	446 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	TRPM4	Q8TD43	1214 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	BEGAIN	Q9BUH8	593 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	COA1	Q9GZY4	146 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	PGAP2	Q9UHJ9	254 aa		13.85	□□□□□ -0.19
NPIPB12-209	ENST00000617311	KRT26	Q7Z3Y9	468 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	SULF1	Q8IWU6	871 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	OGFOD1	Q8N543	542 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ZNF804B	A4D1E1	1349 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	PTPRC	P08575	1304 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	MYO3B	Q8WXR4	1341 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ZNF521	Q96K83	1311 aa		13.84	□□□□□ -0.19
NPIPB12-209	ENST00000617311	ADAMTSL1	Q8N6G6	1762 aa		13.83	□□□□□ -0.19
NPIPB12-209	ENST00000617311	USP17L8	P0C7I0	530 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	CASP7	P55210	303 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	MAP2K1	Q02750	393 aa	Predicted RBP	13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	LMBR1L	Q6UX01	489 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	USP48	Q86UV5	1035 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	KCNQ5	Q9NR82	932 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	CNNM1	Q9NRU3	951 aa		13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	WDR33	Q9C0J8	1336 aa	Known RBP	13.83	□□□□□ -0.2
NPIPB12-209	ENST00000617311	TAF1	P21675	1872 aa		13.82	□□□□□ -0.2
NPIPB12-209	ENST00000617311	LTBP1	Q14766	1721 aa		13.82	□□□□□ -0.2
NPIPB12-209	ENST00000617311	HIRA	P54198	1017 aa	Predicted RBP	13.82	□□□□□ -0.2
NPIPB12-209	ENST00000617311	CHRND	Q07001	517 aa		13.82	□□□□□ -0.2
NPIPB12-209	ENST00000617311	SLFN5	Q08AF3	891 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms