RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 NDFIP2Q9NV92 336 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 HCN2Q9UL51 889 aa8.58□□□□□ -1.04
PVT1-225ENST00000617087 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 KIF4AO95239 1232 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
PVT1-225ENST00000617087 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 ARMC5Q96C12 935 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
PVT1-225ENST00000617087 EFCC1Q9HA90 598 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
PVT1-225ENST00000617087 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 RARAP10276 462 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 ATP2B1P20020 1258 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 SOX18P35713 384 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 PTSQ03393 145 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 RSRP1Q9BUV0 290 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 COPRSQ9NQ92 184 aa8.56□□□□□ -1.04
PVT1-225ENST00000617087 TLR7Q9NYK1 1049 aaKnown RBP8.56□□□□□ -1.04
PVT1-225ENST00000617087 H7C1W4 665 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
PVT1-225ENST00000617087 BNIP3LO60238 219 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
PVT1-225ENST00000617087 DNAJA1P31689 397 aaKnown RBP8.55□□□□□ -1.04
PVT1-225ENST00000617087 GJA8P48165 433 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 MAP3K10Q02779 954 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 ARID5AQ03989 594 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 DBN1Q16643 649 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 TCF12Q99081 682 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
PVT1-225ENST00000617087 TTF2Q9UNY4 1162 aaKnown RBP8.55□□□□□ -1.04
PVT1-225ENST00000617087 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.55□□□□□ -1.04
PVT1-225ENST00000617087 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
PVT1-225ENST00000617087 FCGRTP55899 365 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
PVT1-225ENST00000617087 TRIM22Q8IYM9 498 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 LIN7BQ9HAP6 207 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 CUEDC1Q9NWM3 386 aaPredicted RBP8.54□□□□□ -1.04
PVT1-225ENST00000617087 PPM1HQ9ULR3 514 aa8.54□□□□□ -1.04
PVT1-225ENST00000617087 GFRA3O60609 400 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 PSAPP07602 524 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 NFKB1P19838 968 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 SPEM2Q0P670 501 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 HYAL2Q12891 473 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 PAK2Q13177 524 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 VPS37DQ86XT2 251 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 CCNJLQ8IV13 435 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
PVT1-225ENST00000617087 GMCL1Q96IK5 515 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 ZKSCAN3Q9BRR0 538 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 KBTBD4Q9NVX7 518 aa8.53□□□□□ -1.04
PVT1-225ENST00000617087 RBL2Q08999 1139 aa8.52□□□□□ -1.05
PVT1-225ENST00000617087 DPH6Q7L8W6 267 aa8.52□□□□□ -1.05
PVT1-225ENST00000617087 CEP120Q8N960 986 aa8.52□□□□□ -1.05
PVT1-225ENST00000617087 OSMRQ99650 979 aa8.52□□□□□ -1.05
PVT1-225ENST00000617087 SLC30A3Q99726 388 aa8.52□□□□□ -1.05
PVT1-225ENST00000617087 OXCT2Q9BYC2 517 aaPredicted RBP8.52□□□□□ -1.05
PVT1-225ENST00000617087 ACPPP15309 386 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 ATF4P18848 351 aaPredicted RBP8.51□□□□□ -1.05
PVT1-225ENST00000617087 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
PVT1-225ENST00000617087 PLAURQ03405 335 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 PWP1Q13610 501 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 NCAPG2Q86XI2 1143 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 FAM177A1Q8N128 213 aaPredicted RBP8.51□□□□□ -1.05
PVT1-225ENST00000617087 CCDC155Q8N6L0 562 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 RASGRP4Q8TDF6 673 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
PVT1-225ENST00000617087 ZFYVE1Q9HBF4 777 aa8.51□□□□□ -1.05
PVT1-225ENST00000617087 ST8SIA5O15466 376 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 CCDC85BQ15834 202 aaPredicted RBP8.5□□□□□ -1.05
PVT1-225ENST00000617087 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 DHX32Q7L7V1 743 aaKnown RBP8.5□□□□□ -1.05
PVT1-225ENST00000617087 MCF2L2Q86YR7 1114 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 BHMTQ93088 406 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 GPRASP2Q96D09 838 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 TRIM56Q9BRZ2 755 aaKnown RBP8.5□□□□□ -1.05
PVT1-225ENST00000617087 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 DACH1Q9UI36 760 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 ATXN7L1Q9ULK2 861 aaPredicted RBP8.5□□□□□ -1.05
PVT1-225ENST00000617087 AKAP2Q9Y2D5 859 aa8.5□□□□□ -1.05
PVT1-225ENST00000617087 NFKBIEO00221 500 aa8.49□□□□□ -1.05
PVT1-225ENST00000617087 FGRP09769 529 aa8.49□□□□□ -1.05
PVT1-225ENST00000617087 CD33P20138 364 aa8.49□□□□□ -1.05
PVT1-225ENST00000617087 ITPKAP23677 461 aa8.49□□□□□ -1.05
PVT1-225ENST00000617087 NRLP54845 237 aa8.49□□□□□ -1.05
PVT1-225ENST00000617087 ZNF837Q96EG3 531 aaPredicted RBP8.49□□□□□ -1.05
PVT1-225ENST00000617087 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms