RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 SSR1P43307 286 aaKnown RBP21.43■■□□□ 1.02
CDH23-212ENST00000616684 DNA2P51530 1060 aa21.43■■□□□ 1.02
CDH23-212ENST00000616684 TFCP2Q12800 502 aa21.43■■□□□ 1.02
CDH23-212ENST00000616684 CCDC150Q8NCX0 1101 aa21.43■■□□□ 1.02
CDH23-212ENST00000616684 C19orf44Q9H6X5 657 aa21.43■■□□□ 1.02
CDH23-212ENST00000616684 TBX22Q9Y458 520 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 DNAJC25Q9H1X3 360 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 CHL1O00533 1208 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 N4BP3O15049 544 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 MARCKSP29966 332 aaPredicted RBP21.42■■□□□ 1.02
CDH23-212ENST00000616684 RFC4P35249 363 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 MAP9Q49MG5 647 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 PAF1Q8N7H5 531 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 CGNQ9P2M7 1197 aaKnown RBP21.42■■□□□ 1.02
CDH23-212ENST00000616684 KDM2BQ8NHM5 1336 aa21.42■■□□□ 1.02
CDH23-212ENST00000616684 GOLGA6L9A6NEM1 432 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
CDH23-212ENST00000616684 ZMYM3Q14202 1370 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
CDH23-212ENST00000616684 IL2RBP14784 551 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 UBASH3AP57075 661 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 IFIT1BQ5T764 474 aaKnown RBP21.41■■□□□ 1.02
CDH23-212ENST00000616684 CLCN1P35523 988 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 ATP6V1AP38606 617 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 TRPM2O94759 1503 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 BMP15O95972 392 aa21.41■■□□□ 1.02
CDH23-212ENST00000616684 NIP7Q9Y221 180 aaKnown RBP eCLIP21.4■■□□□ 1.02
CDH23-212ENST00000616684 CCDC40Q4G0X9 1142 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 GNG11P61952 73 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
CDH23-212ENST00000616684 DHX32Q7L7V1 743 aaKnown RBP21.4■■□□□ 1.02
CDH23-212ENST00000616684 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 NLRP3Q96P20 1036 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 RAD50Q92878 1312 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 LUZP1Q86V48 1076 aa21.4■■□□□ 1.02
CDH23-212ENST00000616684 ZMYM4Q5VZL5 1548 aa21.39■■□□□ 1.02
CDH23-212ENST00000616684 AFMP43652 599 aa21.39■■□□□ 1.02
CDH23-212ENST00000616684 APOBRQ0VD83 1088 aa21.39■■□□□ 1.02
CDH23-212ENST00000616684 CCDC171Q6TFL3 1326 aa21.39■■□□□ 1.02
CDH23-212ENST00000616684 SKILP12757 684 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 CEP135Q66GS9 1140 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 RUFY3Q7L099 469 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 SPTLC2O15270 562 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 HSP90AA4PQ58FG1 418 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 HELBQ8NG08 1087 aaPredicted RBP21.39■■□□□ 1.01
CDH23-212ENST00000616684 POTEJP0CG39 1038 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 CPA1P15085 419 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 SYT1P21579 422 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 NOLC1Q14978 699 aaKnown RBP eCLIP21.39■■□□□ 1.01
CDH23-212ENST00000616684 TCERG1LQ5VWI1 586 aa21.39■■□□□ 1.01
CDH23-212ENST00000616684 RNF123Q5XPI4 1314 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 PKNOX2Q96KN3 472 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
CDH23-212ENST00000616684 TTC12Q9H892 705 aaPredicted RBP21.38■■□□□ 1.01
CDH23-212ENST00000616684 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 CETN2P41208 172 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 TYRO3Q06418 890 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 DZIP3Q86Y13 1208 aaKnown RBP21.38■■□□□ 1.01
CDH23-212ENST00000616684 AOPEPQ8N6M6 819 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 TRIM47Q96LD4 638 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 ZKSCAN5Q9Y2L8 839 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
CDH23-212ENST00000616684 ABCC2Q92887 1545 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 PTPDC1A2A3K4 754 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 MCM3P25205 808 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDH23-212ENST00000616684 GSTO1P78417 241 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 FAM114A1Q8IWE2 563 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 SBNO2Q9Y2G9 1366 aa21.37■■□□□ 1.01
CDH23-212ENST00000616684 PAXBP1Q9Y5B6 917 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 ANKRD62A6NC57 917 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
CDH23-212ENST00000616684 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 DYNC1I1O14576 645 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
CDH23-212ENST00000616684 BABAM1Q9NWV8 329 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 RRAGBQ5VZM2 374 aa21.36■■□□□ 1.01
CDH23-212ENST00000616684 PTPRTO14522 1441 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 DDB1Q16531 1140 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 RMND1Q9NWS8 449 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 SBNO1A3KN83 1393 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 GNAQP50148 359 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 MAST1Q9Y2H9 1570 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 GOLGA6L7A0A1B0GV03 622 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 TRIM75PA6NK02 468 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 FEZ1Q99689 392 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 CABP5Q9NP86 173 aa21.35■■□□□ 1.01
CDH23-212ENST00000616684 POLR3GO15318 223 aaPredicted RBP21.34■■□□□ 1.01
CDH23-212ENST00000616684 ZSWIM4Q9H7M6 989 aa21.34■■□□□ 1.01
CDH23-212ENST00000616684 HOXB7P09629 217 aa21.34■■□□□ 1.01
CDH23-212ENST00000616684 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
CDH23-212ENST00000616684 CCDC178Q5BJE1 867 aa21.34■■□□□ 1.01
CDH23-212ENST00000616684 ZNF790Q6PG37 636 aa21.34■■□□□ 1.01
CDH23-212ENST00000616684 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
CDH23-212ENST00000616684 TIMM10P62072 90 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms