RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 H7C1W4 665 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 CYP21A2P08686 494 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 IL2RBP14784 551 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 PDLIM2Q96JY6 352 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 HAUS7Q99871 368 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 CAMK4Q16566 473 aa16.48■□□□□ 0.23
CACNA1C-231ENST00000616390 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
CACNA1C-231ENST00000616390 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
CACNA1C-231ENST00000616390 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
CACNA1C-231ENST00000616390 BRF1Q92994 677 aa16.47■□□□□ 0.23
CACNA1C-231ENST00000616390 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
CACNA1C-231ENST00000616390 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
CACNA1C-231ENST00000616390 A0A0G2JS52 829 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 IFIT1P09914 478 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 GORABQ5T7V8 394 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 A0A1B0GUL7 405 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 CEBPZQ03701 1054 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 ZNF830Q96NB3 372 aaPredicted RBP16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-231ENST00000616390 GPTP24298 496 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 KRT85P78386 507 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
CACNA1C-231ENST00000616390 EYA2O00167 538 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 MRC1P22897 1456 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 CPDO75976 1380 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 H3BQV1 296 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 KRT32Q14532 448 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 PKD1L3Q7Z443 1732 aa16.44■□□□□ 0.22
CACNA1C-231ENST00000616390 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 PDCP20941 246 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 DCCP43146 1447 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 LIG1P18858 919 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 ADORA1P30542 326 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 SPATA32Q96LK8 384 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
CACNA1C-231ENST00000616390 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 HAND2P61296 217 aa16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 WASHC4Q2M389 1173 aa16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 CKAP2LQ8IYA6 745 aa16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 R3HCC1Q9Y3T6 440 aaKnown RBP16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
CACNA1C-231ENST00000616390 ADCY5O95622 1261 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 PI16Q6UXB8 463 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 SCRN1Q12765 414 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 TTC39AQ5SRH9 613 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 COL5A2P05997 1499 aaPredicted RBP16.41■□□□□ 0.22
CACNA1C-231ENST00000616390 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 M0R2C6 588 aa16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 PIGBQ92521 554 aa16.4■□□□□ 0.22
CACNA1C-231ENST00000616390 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 BICD2Q8TD16 824 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 DACT1Q9NYF0 836 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 MAST3O60307 1309 aa16.39■□□□□ 0.21
CACNA1C-231ENST00000616390 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms