RNA–Protein interactions for RNA: ENST00000616306.1

UBXN8-208, Transcript of UBX domain protein 8, humanhuman

TSL 5

Gene UBXN8, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-208ENST00000616306 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
UBXN8-208ENST00000616306 KCTD12Q96CX2 325 aaKnown RBP13.15□□□□□ -0.3
UBXN8-208ENST00000616306 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
UBXN8-208ENST00000616306 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
UBXN8-208ENST00000616306 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 NFKBIEO00221 500 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 C21orf2O43822 256 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 ANXA1P04083 346 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 RASSF7Q02833 373 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 CCDC27Q2M243 656 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
UBXN8-208ENST00000616306 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
UBXN8-208ENST00000616306 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 GPTP24298 496 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
UBXN8-208ENST00000616306 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
UBXN8-208ENST00000616306 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
UBXN8-208ENST00000616306 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 GOLGA8CPA6NN73 597 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 NTSR2O95665 410 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 PRELPP51888 382 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 AIMP1Q12904 312 aaKnown RBP13.12□□□□□ -0.31
UBXN8-208ENST00000616306 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
UBXN8-208ENST00000616306 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
UBXN8-208ENST00000616306 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
UBXN8-208ENST00000616306 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
UBXN8-208ENST00000616306 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
UBXN8-208ENST00000616306 HOXA10P31260 410 aaPredicted RBP13.1□□□□□ -0.31
UBXN8-208ENST00000616306 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 PLBD2Q8NHP8 589 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 IL16Q14005 1332 aa13.1□□□□□ -0.31
UBXN8-208ENST00000616306 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
UBXN8-208ENST00000616306 TOMM70O94826 608 aa13.09□□□□□ -0.31
UBXN8-208ENST00000616306 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
UBXN8-208ENST00000616306 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
UBXN8-208ENST00000616306 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
UBXN8-208ENST00000616306 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
UBXN8-208ENST00000616306 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
UBXN8-208ENST00000616306 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
UBXN8-208ENST00000616306 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
UBXN8-208ENST00000616306 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
UBXN8-208ENST00000616306 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
UBXN8-208ENST00000616306 LAMB2P55268 1798 aa13.07□□□□□ -0.32
UBXN8-208ENST00000616306 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
UBXN8-208ENST00000616306 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBXN8-208ENST00000616306 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
UBXN8-208ENST00000616306 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
UBXN8-208ENST00000616306 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
UBXN8-208ENST00000616306 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
UBXN8-208ENST00000616306 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
UBXN8-208ENST00000616306 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
UBXN8-208ENST00000616306 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
UBXN8-208ENST00000616306 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
UBXN8-208ENST00000616306 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
UBXN8-208ENST00000616306 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 CACNA1FO60840 1977 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
UBXN8-208ENST00000616306 HSPA6P17066 643 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
UBXN8-208ENST00000616306 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
UBXN8-208ENST00000616306 PSMD1Q99460 953 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 HCSTQ9UBK5 93 aa13.05□□□□□ -0.32
UBXN8-208ENST00000616306 OSBPP22059 807 aa13.04□□□□□ -0.32
UBXN8-208ENST00000616306 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
UBXN8-208ENST00000616306 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
UBXN8-208ENST00000616306 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
UBXN8-208ENST00000616306 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
UBXN8-208ENST00000616306 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
UBXN8-208ENST00000616306 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
UBXN8-208ENST00000616306 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
UBXN8-208ENST00000616306 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
UBXN8-208ENST00000616306 PTPN5P54829 565 aa13.03□□□□□ -0.32
UBXN8-208ENST00000616306 FSTL1Q12841 308 aa13.03□□□□□ -0.32
UBXN8-208ENST00000616306 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
UBXN8-208ENST00000616306 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms