RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 HSPA4P34932 840 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
AL353770.3-201ENST00000616253 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 ZPR1O75312 459 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 PTH1RQ03431 593 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 VGLL2Q8N8G2 317 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 CCDC171Q6TFL3 1326 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 GOLIM4O00461 696 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 CCDC158Q5M9N0 1113 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 TTC39AQ5SRH9 613 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 LRRC4BQ9NT99 713 aa12.09□□□□□ -0.47
AL353770.3-201ENST00000616253 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 COL4A1P02462 1669 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 PHF14O94880 888 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 NEK4P51957 841 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
AL353770.3-201ENST00000616253 TRIM37O94972 964 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 PDE8BO95263 885 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 AKAP11Q9UKA4 1901 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 TAF1P21675 1872 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 MYH7P12883 1935 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 CHGBP05060 677 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 NFKBIBQ15653 356 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 C3orf67Q6ZVT6 689 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
AL353770.3-201ENST00000616253 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 RFC4P35249 363 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 DDIT3P35638 169 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 IGHMBP2P38935 993 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 SF3B2Q13435 895 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 TRAPPC3LQ5T215 181 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
AL353770.3-201ENST00000616253 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 SCARF1Q14162 830 aa12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 KCNJ4P48050 445 aa12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 LPIN2Q92539 896 aa12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 MAP4K1Q92918 833 aa12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
AL353770.3-201ENST00000616253 ADRA2BP18089 450 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 FGFR2P21802 821 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 CCDC129Q6ZRS4 1044 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 KCNB2Q92953 911 aa12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
AL353770.3-201ENST00000616253 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 TAF5LO75529 589 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 SLC5A1P13866 664 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 MCAMP43121 646 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 ZAP70P43403 619 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 MCM2P49736 904 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 FRAT2O75474 233 aaPredicted RBP12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 PHKA1P46020 1223 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 CCDC102BQ68D86 513 aa12.03□□□□□ -0.48
AL353770.3-201ENST00000616253 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms