RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TAF6LQ9Y6J9 622 aa22.98■■□□□ 1.27
MMP28-204ENST00000615136 PDE8AO60658 829 aa22.98■■□□□ 1.27
MMP28-204ENST00000615136 HCLS1P14317 486 aaPredicted RBP22.98■■□□□ 1.27
MMP28-204ENST00000615136 SPATA31A6Q5VVP1 1343 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 CREB3L3Q68CJ9 461 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 KBTBD3Q8NAB2 608 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 XAGE2Q96GT9 111 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
MMP28-204ENST00000615136 PANK2Q9BZ23 570 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 FBXO3Q9UK99 471 aa22.97■■□□□ 1.27
MMP28-204ENST00000615136 TAF5LO75529 589 aa22.96■■□□□ 1.27
MMP28-204ENST00000615136 CASTP20810 708 aaKnown RBP22.96■■□□□ 1.27
MMP28-204ENST00000615136 LDHAL6AQ6ZMR3 332 aa22.96■■□□□ 1.27
MMP28-204ENST00000615136 THSD7AQ9UPZ6 1657 aa22.96■■□□□ 1.27
MMP28-204ENST00000615136 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
MMP28-204ENST00000615136 AK2P54819 239 aa22.96■■□□□ 1.27
MMP28-204ENST00000615136 IFIT1P09914 478 aaKnown RBP22.95■■□□□ 1.26
MMP28-204ENST00000615136 MCTP1Q6DN14 999 aa22.95■■□□□ 1.26
MMP28-204ENST00000615136 JAKMIP1Q96N16 626 aaKnown RBP22.95■■□□□ 1.26
MMP28-204ENST00000615136 SLC27A2O14975 620 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 SCARF1Q14162 830 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 LMBRD1Q9NUN5 540 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 DDX49Q9Y6V7 483 aaKnown RBP22.94■■□□□ 1.26
MMP28-204ENST00000615136 RFX7Q2KHR2 1363 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 HSPA1LP34931 641 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 KCNJ4P48050 445 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 METTL24Q5JXM2 366 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 RUFY3Q7L099 469 aa22.94■■□□□ 1.26
MMP28-204ENST00000615136 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
MMP28-204ENST00000615136 GAS2L3Q86XJ1 694 aa22.93■■□□□ 1.26
MMP28-204ENST00000615136 VGLL2Q8N8G2 317 aa22.93■■□□□ 1.26
MMP28-204ENST00000615136 NIP7Q9Y221 180 aaKnown RBP eCLIP22.93■■□□□ 1.26
MMP28-204ENST00000615136 DDX60Q8IY21 1712 aaKnown RBP22.93■■□□□ 1.26
MMP28-204ENST00000615136 UTP14AQ9BVJ6 771 aaKnown RBP22.92■■□□□ 1.26
MMP28-204ENST00000615136 CNNM1Q9NRU3 951 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 BTAF1O14981 1849 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 NTSR2O95665 410 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 PI16Q6UXB8 463 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 ZSWIM6Q9HCJ5 1215 aa22.92■■□□□ 1.26
MMP28-204ENST00000615136 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
MMP28-204ENST00000615136 BCORQ6W2J9 1755 aa22.91■■□□□ 1.26
MMP28-204ENST00000615136 FKBP4Q02790 459 aaKnown RBP eCLIP22.91■■□□□ 1.26
MMP28-204ENST00000615136 ATP2B3Q16720 1220 aa22.91■■□□□ 1.26
MMP28-204ENST00000615136 MCMDC2Q4G0Z9 681 aa22.91■■□□□ 1.26
MMP28-204ENST00000615136 LRP5O75197 1615 aa22.9■■□□□ 1.26
MMP28-204ENST00000615136 LARGE1O95461 756 aa22.9■■□□□ 1.26
MMP28-204ENST00000615136 BRD1O95696 1058 aa22.9■■□□□ 1.26
MMP28-204ENST00000615136 TTC39AQ5SRH9 613 aa22.9■■□□□ 1.26
MMP28-204ENST00000615136 GORABQ5T7V8 394 aa22.9■■□□□ 1.26
MMP28-204ENST00000615136 RPAP1Q9BWH6 1393 aaPredicted RBP22.9■■□□□ 1.26
MMP28-204ENST00000615136 CCDC158Q5M9N0 1113 aa22.89■■□□□ 1.26
MMP28-204ENST00000615136 HELBQ8NG08 1087 aaPredicted RBP22.89■■□□□ 1.26
MMP28-204ENST00000615136 TM6SF1Q9BZW5 370 aa22.89■■□□□ 1.26
MMP28-204ENST00000615136 COL4A1P02462 1669 aa22.89■■□□□ 1.25
MMP28-204ENST00000615136 ZKSCAN1P17029 563 aaPredicted RBP22.89■■□□□ 1.25
MMP28-204ENST00000615136 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.25
MMP28-204ENST00000615136 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
MMP28-204ENST00000615136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.89■■□□□ 1.25
MMP28-204ENST00000615136 CHAMP1Q96JM3 812 aa22.89■■□□□ 1.25
MMP28-204ENST00000615136 PARP10Q53GL7 1025 aa22.88■■□□□ 1.25
MMP28-204ENST00000615136 VPS53Q5VIR6 699 aa22.88■■□□□ 1.25
MMP28-204ENST00000615136 GJD4Q96KN9 370 aaPredicted RBP22.88■■□□□ 1.25
MMP28-204ENST00000615136 PDRG1Q9NUG6 133 aa22.88■■□□□ 1.25
MMP28-204ENST00000615136 AFF2P51816 1311 aa22.88■■□□□ 1.25
MMP28-204ENST00000615136 NHSQ6T4R5 1651 aa22.88■■□□□ 1.25
MMP28-204ENST00000615136 DTNBO60941 627 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 ZAP70P43403 619 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 ZMYM1Q5SVZ6 1142 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 TCEANC2Q96MN5 208 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 CYP46A1Q9Y6A2 500 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 SPEF2Q9C093 1822 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 SNAP23O00161 211 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 PDE8BO95263 885 aa22.87■■□□□ 1.25
MMP28-204ENST00000615136 FOXD4L5Q5VV16 416 aaPredicted RBP22.87■■□□□ 1.25
MMP28-204ENST00000615136 FOXD4L4Q8WXT5 416 aaPredicted RBP22.87■■□□□ 1.25
MMP28-204ENST00000615136 ZNF445P59923 1031 aa22.86■■□□□ 1.25
MMP28-204ENST00000615136 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
MMP28-204ENST00000615136 AK7Q96M32 723 aa22.86■■□□□ 1.25
MMP28-204ENST00000615136 LIMCH1Q9UPQ0 1083 aa22.86■■□□□ 1.25
MMP28-204ENST00000615136 AKAP11Q9UKA4 1901 aa22.86■■□□□ 1.25
MMP28-204ENST00000615136 MAST3O60307 1309 aa22.85■■□□□ 1.25
MMP28-204ENST00000615136 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
MMP28-204ENST00000615136 EP400Q96L91 3159 aa22.85■■□□□ 1.25
MMP28-204ENST00000615136 RNF113AO15541 343 aaKnown RBP22.85■■□□□ 1.25
MMP28-204ENST00000615136 MCAMP43121 646 aa22.85■■□□□ 1.25
MMP28-204ENST00000615136 BCL2L12Q9HB09 334 aa22.85■■□□□ 1.25
MMP28-204ENST00000615136 LAMB2P55268 1798 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 A0A0G2JLW4 131 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 M0R2C6 588 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 C3orf67Q6ZVT6 689 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 HELLSQ9NRZ9 838 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 CYP21A2P08686 494 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 ST3GAL1Q11201 340 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 RNF20Q5VTR2 975 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 BICDL1Q6ZP65 573 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 OSBP2Q969R2 916 aa22.84■■□□□ 1.25
MMP28-204ENST00000615136 PRPF40AO75400 957 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms