RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 AKAP17AQ02040 695 aaKnown RBP14.64□□□□□ -0.07
MSH6-213ENST00000614496 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 CNNM1Q9NRU3 951 aa14.64□□□□□ -0.07
MSH6-213ENST00000614496 SAFBQ15424 915 aaKnown RBP eCLIP14.63□□□□□ -0.07
MSH6-213ENST00000614496 TNNI3KQ59H18 835 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 FPGT-TNNI3KV9GXZ4 949 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 FTOQ9C0B1 505 aaKnown RBP eCLIP14.63□□□□□ -0.07
MSH6-213ENST00000614496 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 SASH1O94885 1247 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 SNRPA1P09661 255 aaKnown RBP14.63□□□□□ -0.07
MSH6-213ENST00000614496 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
MSH6-213ENST00000614496 RPAP1Q9BWH6 1393 aaPredicted RBP14.63□□□□□ -0.07
MSH6-213ENST00000614496 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 CABLES1Q8TDN4 633 aa14.63□□□□□ -0.07
MSH6-213ENST00000614496 TOM1L2Q6ZVM7 507 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 DHX32Q7L7V1 743 aaKnown RBP14.62□□□□□ -0.07
MSH6-213ENST00000614496 KIAA1524Q8TCG1 905 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 PAG1Q9NWQ8 432 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 LMOD1P29536 600 aaPredicted RBP14.62□□□□□ -0.07
MSH6-213ENST00000614496 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 GCKRQ14397 625 aa14.62□□□□□ -0.07
MSH6-213ENST00000614496 ARGLU1Q9NWB6 273 aaPredicted RBP14.62□□□□□ -0.07
MSH6-213ENST00000614496 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
MSH6-213ENST00000614496 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
MSH6-213ENST00000614496 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
MSH6-213ENST00000614496 PAXBP1Q9Y5B6 917 aa14.61□□□□□ -0.07
MSH6-213ENST00000614496 URI1O94763 535 aaPredicted RBP14.61□□□□□ -0.07
MSH6-213ENST00000614496 SNW1Q13573 536 aaKnown RBP14.61□□□□□ -0.07
MSH6-213ENST00000614496 ZNF594Q96JF6 807 aaPredicted RBP14.61□□□□□ -0.07
MSH6-213ENST00000614496 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
MSH6-213ENST00000614496 IFNL2Q8IZJ0 200 aa14.61□□□□□ -0.07
MSH6-213ENST00000614496 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
MSH6-213ENST00000614496 ZNF496Q96IT1 587 aaPredicted RBP14.6□□□□□ -0.07
MSH6-213ENST00000614496 SMTNL1A8MU46 457 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 ZNF213O14771 459 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 RXRAP19793 462 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 GTF3C6Q969F1 213 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 TAF5LO75529 589 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 MICU3Q86XE3 530 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 HOOK1Q9UJC3 728 aaKnown RBP14.6□□□□□ -0.07
MSH6-213ENST00000614496 TBC1D2BQ9UPU7 963 aa14.6□□□□□ -0.07
MSH6-213ENST00000614496 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 METTL24Q5JXM2 366 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 NUP133Q8WUM0 1156 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 IFNKQ9P0W0 207 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 CAVIN2O95810 425 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 UBXN4Q92575 508 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 METTL22Q9BUU2 404 aaPredicted RBP14.59□□□□□ -0.07
MSH6-213ENST00000614496 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 ERICH2A1L162 156 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 NEMFO60524 1076 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 USP28Q96RU2 1077 aa14.59□□□□□ -0.07
MSH6-213ENST00000614496 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
MSH6-213ENST00000614496 DBNLQ9UJU6 430 aaKnown RBP14.59□□□□□ -0.07
MSH6-213ENST00000614496 KDRP35968 1356 aa14.58□□□□□ -0.07
MSH6-213ENST00000614496 CHGBP05060 677 aa14.58□□□□□ -0.08
MSH6-213ENST00000614496 GPTP24298 496 aa14.58□□□□□ -0.08
MSH6-213ENST00000614496 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.082e-8■□□□□ 9.7
MSH6-213ENST00000614496 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
MSH6-213ENST00000614496 IFT172Q9UG01 1749 aa14.58□□□□□ -0.08
MSH6-213ENST00000614496 CACTINQ8WUQ7 758 aaKnown RBP14.58□□□□□ -0.08
MSH6-213ENST00000614496 CYP21A2P08686 494 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 PRC1O43663 620 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 GSDMDP57764 484 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 PRDM11Q9NQV5 511 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 SPTLC2O15270 562 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 FAM160A1Q05DH4 1040 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 SCRN1Q12765 414 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 ARID5BQ14865 1188 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 KIF6Q6ZMV9 814 aa14.57□□□□□ -0.08
MSH6-213ENST00000614496 EPHA10Q5JZY3 1008 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 SYT10Q6XYQ8 523 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 DNAI1Q9UI46 699 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 TOP1P11387 765 aaKnown RBP14.56□□□□□ -0.08
MSH6-213ENST00000614496 ATP5JP18859 108 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 TEX35Q5T0J7 233 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 KLHL10Q6JEL2 608 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 POLR3GO15318 223 aaPredicted RBP14.56□□□□□ -0.08
MSH6-213ENST00000614496 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
MSH6-213ENST00000614496 C11orf57Q6ZUT1 292 aaPredicted RBP14.56□□□□□ -0.08
MSH6-213ENST00000614496 KBTBD3Q8NAB2 608 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 CDC42BPGQ6DT37 1551 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 KIF20BQ96Q89 1820 aa14.56□□□□□ -0.08
MSH6-213ENST00000614496 TOB2Q14106 344 aaPredicted RBP14.55□□□□□ -0.08
MSH6-213ENST00000614496 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 OVOS2A0A0J9YW53 1432 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 OVOS2Q6IE36 1432 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 CNNM3Q8NE01 707 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
MSH6-213ENST00000614496 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms