RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
POLR2J3-220ENST00000613744 DNAAF4Q8WXU2 420 aa26.09■■□□□ 1.77
POLR2J3-220ENST00000613744 GADD45BO75293 160 aaPredicted RBP26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 UBE2HP62256 183 aa26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 TUBGCP6Q96RT7 1819 aa26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 CAMTA2O94983 1202 aa26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 COL23A1Q86Y22 540 aaPredicted RBP26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 MYD88Q99836 296 aa26.08■■□□□ 1.77
POLR2J3-220ENST00000613744 A0A087WZG4 1122 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 ATP5J2-PTCD1G3V325 749 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 ZPR1O75312 459 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 HMMRO75330 724 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 HMGB2P26583 209 aaKnown RBP26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 ESYT1Q9BSJ8 1104 aa26.07■■□□□ 1.76
POLR2J3-220ENST00000613744 PDGFDQ9GZP0 370 aaPredicted RBP26.06■■□□□ 1.76
POLR2J3-220ENST00000613744 CCT4P50991 539 aaKnown RBP26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 CWF19L2Q2TBE0 894 aaKnown RBP26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 FUCA2Q9BTY2 467 aa26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 NARFQ9UHQ1 456 aa26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 C4AP0C0L4 1744 aa26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 ARFGEF2Q9Y6D5 1785 aa26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 HCLS1P14317 486 aaPredicted RBP26.05■■□□□ 1.76
POLR2J3-220ENST00000613744 ADRA2BP18089 450 aa26.04■■□□□ 1.76
POLR2J3-220ENST00000613744 GPTP24298 496 aa26.04■■□□□ 1.76
POLR2J3-220ENST00000613744 METTL22Q9BUU2 404 aaPredicted RBP26.04■■□□□ 1.76
POLR2J3-220ENST00000613744 PDE1AP54750 535 aa26.03■■□□□ 1.76
POLR2J3-220ENST00000613744 GIGYF2Q6Y7W6 1299 aaKnown RBP26.03■■□□□ 1.76
POLR2J3-220ENST00000613744 C17orf53Q8N3J3 647 aaPredicted RBP26.03■■□□□ 1.76
POLR2J3-220ENST00000613744 USP42Q9H9J4 1324 aaKnown RBP26.03■■□□□ 1.76
POLR2J3-220ENST00000613744 BICDL1Q6ZP65 573 aa26.03■■□□□ 1.76
POLR2J3-220ENST00000613744 ERVV-1B6SEH8 477 aa26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 U2AF2P26368 475 aaKnown RBP eCLIP26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 BEND3Q5T5X7 828 aa26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 ATP6V1DQ9Y5K8 247 aa26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 SPDYE4A6NLX3 237 aa26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 IGKV5-2P06315 115 aa26.02■■□□□ 1.76
POLR2J3-220ENST00000613744 NEXNQ0ZGT2 675 aa26.01■■□□□ 1.75
POLR2J3-220ENST00000613744 SRCIN1Q9C0H9 1055 aa26.01■■□□□ 1.75
POLR2J3-220ENST00000613744 KCNF1Q9H3M0 494 aa26.01■■□□□ 1.75
POLR2J3-220ENST00000613744 CGNQ9P2M7 1197 aaKnown RBP26.01■■□□□ 1.75
POLR2J3-220ENST00000613744 SMARCA5O60264 1052 aaPredicted RBP26■■□□□ 1.75
POLR2J3-220ENST00000613744 TCIRG1Q13488 830 aa26■■□□□ 1.75
POLR2J3-220ENST00000613744 R3HDM1Q15032 1099 aaKnown RBP26■■□□□ 1.75
POLR2J3-220ENST00000613744 MEIS3Q99687 375 aa26■■□□□ 1.75
POLR2J3-220ENST00000613744 NUP98P52948 1817 aa26■■□□□ 1.75
POLR2J3-220ENST00000613744 FAM177BA6PVY3 158 aa26■■□□□ 1.75
POLR2J3-220ENST00000613744 FAM193AP78312 1265 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 TBC1D9BQ66K14 1250 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 PYCARDQ9ULZ3 195 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 PXDNLA1KZ92 1463 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 PSDA5PKW4 1024 aaPredicted RBP25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 SMTNL1A8MU46 457 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 GYS1P13807 737 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 MSL1Q68DK7 614 aa25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 BBXQ8WY36 941 aaPredicted RBP25.99■■□□□ 1.75
POLR2J3-220ENST00000613744 FLAD1Q8NFF5 587 aa25.98■■□□□ 1.75
POLR2J3-220ENST00000613744 NIP7Q9Y221 180 aaKnown RBP eCLIP25.98■■□□□ 1.75
POLR2J3-220ENST00000613744 BCORQ6W2J9 1755 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 SALL3Q9BXA9 1300 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 TCHHQ07283 1943 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 ZSCAN22P10073 491 aaPredicted RBP25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 LINS1Q8NG48 757 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 GDPD2Q9HCC8 539 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 CTNNA3Q9UI47 895 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 ZNF652Q9Y2D9 606 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 NEURL1BA8MQ27 555 aa25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 GTF2E1P29083 439 aaPredicted RBP25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 NCBP1Q09161 790 aaKnown RBP25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 ZNF771Q7L3S4 317 aaPredicted RBP25.97■■□□□ 1.75
POLR2J3-220ENST00000613744 SCN7AQ01118 1682 aa25.96■■□□□ 1.75
POLR2J3-220ENST00000613744 MPNDQ8N594 471 aa25.96■■□□□ 1.75
POLR2J3-220ENST00000613744 UBN2Q6ZU65 1347 aa25.96■■□□□ 1.75
POLR2J3-220ENST00000613744 DDX41Q9UJV9 622 aaKnown RBP25.95■■□□□ 1.75
POLR2J3-220ENST00000613744 PAXBP1Q9Y5B6 917 aa25.95■■□□□ 1.75
POLR2J3-220ENST00000613744 CLEC4GQ6UXB4 293 aa25.95■■□□□ 1.74
POLR2J3-220ENST00000613744 ISCA1Q9BUE6 129 aa25.95■■□□□ 1.74
POLR2J3-220ENST00000613744 PALD1Q9ULE6 856 aa25.95■■□□□ 1.74
POLR2J3-220ENST00000613744 MORC2Q9Y6X9 1032 aaPredicted RBP25.95■■□□□ 1.74
POLR2J3-220ENST00000613744 HSP90AB3PQ58FF7 597 aa25.94■■□□□ 1.74
POLR2J3-220ENST00000613744 ZNF34Q8IZ26 560 aa25.94■■□□□ 1.74
POLR2J3-220ENST00000613744 CHMLP26374 656 aa25.94■■□□□ 1.74
POLR2J3-220ENST00000613744 AFDNP55196 1824 aaKnown RBP25.93■■□□□ 1.74
POLR2J3-220ENST00000613744 NLRP10Q86W26 655 aa25.93■■□□□ 1.74
POLR2J3-220ENST00000613744 CREBRFQ8IUR6 639 aa25.93■■□□□ 1.74
POLR2J3-220ENST00000613744 CNPY2Q9Y2B0 182 aa25.93■■□□□ 1.74
POLR2J3-220ENST00000613744 AOX1Q06278 1338 aa25.93■■□□□ 1.74
POLR2J3-220ENST00000613744 CCDC66A2RUB6 948 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 CCDC192P0DO97 292 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 USP44Q9H0E7 712 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 GCKRQ14397 625 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 NFIXQ14938 502 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 SUSD4Q5VX71 490 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 TMEM51Q9NW97 253 aa25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 CWC25Q9NXE8 425 aaPredicted RBP25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.92■■□□□ 1.74
POLR2J3-220ENST00000613744 SYNE4Q8N205 404 aa25.91■■□□□ 1.74
POLR2J3-220ENST00000613744 SETDB2Q96T68 719 aa25.91■■□□□ 1.74
POLR2J3-220ENST00000613744 ANO2Q9NQ90 1003 aa25.91■■□□□ 1.74
POLR2J3-220ENST00000613744 C9orf78Q9NZ63 289 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms