RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 MCM5P33992 734 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 MAP9Q49MG5 647 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 SVOPQ8N4V2 548 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 RSPH1Q8WYR4 309 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 ZBTB9Q96C00 473 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 GOPCQ9HD26 462 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 HMX1Q9NP08 348 aaPredicted RBP6.59□□□□□ -1.35
CCL16-206ENST00000613642 RSPH14Q9UHP6 348 aa6.59□□□□□ -1.35
CCL16-206ENST00000613642 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
CCL16-206ENST00000613642 CTDP1Q9Y5B0 961 aaPredicted RBP6.59□□□□□ -1.35
CCL16-206ENST00000613642 CDC14CA4D256 554 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 U2SURPO15042 1029 aaKnown RBP6.58□□□□□ -1.36
CCL16-206ENST00000613642 TPPPO94811 219 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 XRCC6P12956 609 aaKnown RBP eCLIP6.58□□□□□ -1.36
CCL16-206ENST00000613642 ATICP31939 592 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 PTGIRP43119 386 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 ADCY2Q08462 1091 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
CCL16-206ENST00000613642 MLECQ14165 292 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 AP1ARQ63HQ0 302 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 HSCBQ8IWL3 235 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 C1orf131Q8NDD1 294 aaKnown RBP6.58□□□□□ -1.36
CCL16-206ENST00000613642 VPS37AQ8NEZ2 397 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 TDRD7Q8NHU6 1098 aaKnown RBP6.58□□□□□ -1.36
CCL16-206ENST00000613642 CCDC47Q96A33 483 aaKnown RBP6.58□□□□□ -1.36
CCL16-206ENST00000613642 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
CCL16-206ENST00000613642 ERICH4A6NGS2 130 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 TRAK2O60296 914 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 KINO60870 393 aaKnown RBP6.57□□□□□ -1.36
CCL16-206ENST00000613642 USP17L8P0C7I0 530 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 CCDC159P0C7I6 412 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 IMPDH2P12268 514 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 RBM5P52756 815 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCL16-206ENST00000613642 SESN3P58005 492 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 CBX1P83916 185 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 BECN1Q14457 450 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 PPP2R5AQ15172 486 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
CCL16-206ENST00000613642 ZNF662Q6ZS27 426 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 MORC1Q86VD1 984 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 CCAR1Q8IX12 1150 aaKnown RBP6.57□□□□□ -1.36
CCL16-206ENST00000613642 PDILTQ8N807 584 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 PNMA1Q8ND90 353 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 OGFRQ9NZT2 677 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 KANK1Q14678 1352 aa6.57□□□□□ -1.36
CCL16-206ENST00000613642 ERCC6Q03468 1493 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 CAND2O75155 1236 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 CDKL5O76039 1030 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 VCAM1P19320 739 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 GTF2F1P35269 517 aaKnown RBP eCLIP6.56□□□□□ -1.36
CCL16-206ENST00000613642 RWDD2BP57060 319 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 RAB15P59190 212 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 SRPK2P78362 688 aaKnown RBP6.56□□□□□ -1.36
CCL16-206ENST00000613642 CCDC173Q0VFZ6 552 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 NOM1Q5C9Z4 860 aaKnown RBP6.56□□□□□ -1.36
CCL16-206ENST00000613642 C11orf96Q7Z7L8 435 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 TRIM74Q86UV6 250 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 TRIM73Q86UV7 250 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 RBM12BQ8IXT5 1001 aaKnown RBP6.56□□□□□ -1.36
CCL16-206ENST00000613642 EFCAB13Q8IY85 973 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 UBXN4Q92575 508 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 TNPO1Q92973 898 aaKnown RBP6.56□□□□□ -1.36
CCL16-206ENST00000613642 PRIMPOLQ96LW4 560 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 IRAK4Q9NWZ3 460 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 KLHL42Q9P2K6 505 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 AKAP2Q9Y2D5 859 aa6.56□□□□□ -1.36
CCL16-206ENST00000613642 RBM47A0AV96 593 aaKnown RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 FOSL1P15407 271 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 RNF144AP50876 292 aaPredicted RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 FLIIQ13045 1269 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 ZNF394Q53GI3 561 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 DNAJC21Q5F1R6 531 aaKnown RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 LYSMD3Q7Z3D4 306 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 UBE2Q1Q7Z7E8 422 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 PCGF5Q86SE9 256 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 SUGP1Q8IWZ8 645 aaKnown RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 TTC30BQ8N4P2 665 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 CCDC191Q8NCU4 936 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 ANKRD20A12PQ8NF67 263 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 CEP89Q96ST8 783 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 SH3GL3Q99963 347 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 SLX1AQ9BQ83 275 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 PAGR1Q9BTK6 254 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 SEZ6LQ9BYH1 1024 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 RWDD1Q9H446 243 aaPredicted RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 TRPV5Q9NQA5 729 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 CUEDC1Q9NWM3 386 aaPredicted RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 USP25Q9UHP3 1055 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 R3HCC1Q9Y3T6 440 aaKnown RBP6.55□□□□□ -1.36
CCL16-206ENST00000613642 JRKLQ9Y4A0 524 aa6.55□□□□□ -1.36
CCL16-206ENST00000613642 SHTN1A0MZ66 631 aa6.54□□□□□ -1.36
CCL16-206ENST00000613642 A6NJR5 290 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms