RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 KIF20BQ96Q89 1820 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 SLFN14P0C7P3 912 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 P3H4Q92791 437 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 RPRD2Q5VT52 1461 aaKnown RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 AKAP12Q02952 1782 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ACTR5Q9H9F9 607 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 MAGI2Q86UL8 1455 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 STX6O43752 255 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 RASIP1Q5U651 963 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ARAP1Q96P48 1450 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ATP2C2O75185 946 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 MAP4K4O95819 1239 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 CCDC80Q76M96 950 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 PDE11AQ9HCR9 933 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ADAMTS8Q9UP79 889 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 UTP6Q9NYH9 597 aaKnown RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ST20-MTHFSA0A0A6YYL1 179 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 INF2Q27J81 1249 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 GIMAP6Q6P9H5 292 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 CKAP2LQ8IYA6 745 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 MIS18AQ9NYP9 233 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 CFAP58Q5T655 872 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 GKAP1Q5VSY0 366 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-213ENST00000613099 RAB3IL1Q8TBN0 382 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ANKRD7Q92527 254 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 HDGFL1Q5TGJ6 251 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 STMN2Q93045 179 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 SPAG5Q96R06 1193 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 PPP1R12CQ9BZL4 782 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 SLC8A3P57103 927 aa5.62□□□□□ -1.51
VPS13D-213ENST00000613099 ACRBPQ8NEB7 543 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SPDL1Q96EA4 605 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SCOCQ9UIL1 159 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 BCL2L13Q9BXK5 485 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 RASSF2P50749 326 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 RCSD1Q6JBY9 416 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CARD10Q9BWT7 1032 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ZSWIM4Q9H7M6 989 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 NOL3O60936 208 aaKnown RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 GIGYF1O75420 1035 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SLFN5Q08AF3 891 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CROCCP2Q86T23 111 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 DMRT2Q9Y5R5 561 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CIB2O75838 187 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 RPGRIP1Q96KN7 1286 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 PSMC4P43686 418 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 NCBP1Q09161 790 aaKnown RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 DRP2Q13474 957 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CNNM3Q8NE01 707 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 PSD3Q9NYI0 1048 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ADAM21Q9UKJ8 722 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 FLOT1O75955 427 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SUGP1Q8IWZ8 645 aaKnown RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CTNNBL1Q8WYA6 563 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ITFG2Q969R8 447 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CENPKQ9BS16 269 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 WDHD1O75717 1129 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 HHATQ5VTY9 493 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 FRMD3A2A2Y4 597 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CASQ2O14958 399 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ZNF653Q96CK0 615 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SMC6Q96SB8 1091 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 CCT5P48643 541 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 BAIAP2L1Q9UHR4 511 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 GOLGA8KD6RF30 607 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 APBA1Q02410 837 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 HAUS1Q96CS2 278 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 RGL1Q9NZL6 768 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 UHRF1BP1Q6BDS2 1440 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 ANO6Q4KMQ2 910 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 GRAMD4Q6IC98 578 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 TEX9Q8N6V9 391 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 LRRC45Q96CN5 670 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 SEC62Q99442 399 aaKnown RBP5.61□□□□□ -1.51
VPS13D-213ENST00000613099 LMBRD1Q9NUN5 540 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 TIAM1Q13009 1591 aa5.61□□□□□ -1.51
VPS13D-213ENST00000613099 EIF2AK4Q9P2K8 1649 aaKnown RBP5.6□□□□□ -1.51
VPS13D-213ENST00000613099 STXBP3O00186 592 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 KRT32Q14532 448 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 RMI1Q9H9A7 625 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 SNUPNO95149 360 aaKnown RBP5.6□□□□□ -1.51
VPS13D-213ENST00000613099 GDAP1L1Q96MZ0 367 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 ZC4H2Q9NQZ6 224 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 ERBB4Q15303 1308 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 SSBP05455 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS13D-213ENST00000613099 CNTROBQ8N137 903 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 PLB1Q6P1J6 1458 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 TRIM66O15016 1216 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 SRLQ86TD4 932 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 GAS2L3Q86XJ1 694 aa5.6□□□□□ -1.51
VPS13D-213ENST00000613099 TFIP11Q9UBB9 837 aaKnown RBP5.6□□□□□ -1.51
VPS13D-213ENST00000613099 CHRM1P11229 460 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-213ENST00000613099 GNPTABQ3T906 1256 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms