RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 TSG101Q99816 390 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FSCBQ5H9T9 825 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 KIF4AO95239 1232 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 NPR1P16066 1061 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 RARSP54136 660 aaKnown RBP12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 SIL1Q9H173 461 aa12.28□□□□□ -0.44
CNTNAP3B-211ENST00000612828 CASP2P42575 452 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MNAT1P51948 309 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 BRD3Q15059 726 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 FIBPO43427 364 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 DCLK2Q8N568 766 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 MPHOSPH8Q99549 860 aa12.27□□□□□ -0.44
CNTNAP3B-211ENST00000612828 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TRIM7Q9C029 511 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MYO1BO43795 1136 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CHD1LQ86WJ1 897 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TPX2Q9ULW0 747 aaKnown RBP12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PLCB3Q01970 1234 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 FBXW10Q5XX13 1052 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 VPS36Q86VN1 386 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PRAM1Q96QH2 718 aa12.27□□□□□ -0.45
CNTNAP3B-211ENST00000612828 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SERPINI2O75830 405 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PPFIBP2Q8ND30 876 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SSH1Q8WYL5 1049 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PPHLN1Q8NEY8 458 aaKnown RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SCHIP1Q9P0W5 487 aaPredicted RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 HSF2BPO75031 334 aa12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SURF6O75683 361 aaKnown RBP12.26□□□□□ -0.45
CNTNAP3B-211ENST00000612828 GCKP35557 465 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 STXBP3O00186 592 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KIF22Q14807 665 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 DBN1Q16643 649 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 UBE3BQ7Z3V4 1068 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SATB2Q9UPW6 733 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ABCC5O15440 1437 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ZNF569Q5MCW4 686 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SELENOSQ9BQE4 189 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TACC1O75410 805 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SP4Q02446 784 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ANO6Q4KMQ2 910 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 BTN2A2Q8WVV5 523 aa12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SUPT3HB4E1H0 165 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KRT13P13646 458 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SKOR1P84550 965 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCDC38Q502W7 563 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KIFC2Q96AC6 838 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TRPC5Q9UL62 973 aaPredicted RBP12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SNUPNO95149 360 aaKnown RBP12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PDCLQ13371 301 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 FCHSD2O94868 740 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TBC1D22AQ8WUA7 517 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PPP1R12CQ9BZL4 782 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KRT33BQ14525 404 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCDC25Q86WR0 208 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
CNTNAP3B-211ENST00000612828 DDAH1O94760 285 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCDC122Q5T0U0 273 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NEUROD4Q9HD90 331 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SZRD1Q7Z422 152 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 EHBP1L1Q8N3D4 1523 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 IQANK1A0A1B0GTG1 560 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SSFA2P28290 1259 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MAP7Q14244 749 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms