RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 BRF1Q92994 677 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 M0R2C6 588 aa16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 UBE2HP62256 183 aa16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 IL15P40933 162 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA3-202ENST00000612467 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 HAND2P61296 217 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 CAMK4Q16566 473 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 MAST3O60307 1309 aa16.74■□□□□ 0.27
PCDHGA3-202ENST00000612467 FGD1P98174 961 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 CCDC57Q2TAC2 916 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 CCDC183Q5T5S1 534 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 HMG20BQ9P0W2 317 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 USP25Q9UHP3 1055 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 LIG1P18858 919 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 OSBP2Q969R2 916 aa16.73■□□□□ 0.27
PCDHGA3-202ENST00000612467 TNS2Q63HR2 1409 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 ABCA3Q99758 1704 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 SCRN1Q12765 414 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 FAM177BA6PVY3 158 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
PCDHGA3-202ENST00000612467 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 TSGA10IPQ3SY00 556 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 GTF3C6Q969F1 213 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 TAF7LQ5H9L4 462 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 ZMYM1Q5SVZ6 1142 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 ATP6V1DQ9Y5K8 247 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
PCDHGA3-202ENST00000612467 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 GREM2Q9H772 168 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 SNAP23O00161 211 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 ZAP70P43403 619 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 WASHC4Q2M389 1173 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
PCDHGA3-202ENST00000612467 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 KIF6Q6ZMV9 814 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 E7EWF7 191 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 FOXP2O15409 715 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 RNF113AO15541 343 aaKnown RBP16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 DENND2AQ9ULE3 1009 aa16.69■□□□□ 0.26
PCDHGA3-202ENST00000612467 AP5Z1O43299 807 aa16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 KRT85P78386 507 aa16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 KRT32Q14532 448 aa16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 HELBQ8NG08 1087 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 PHF14O94880 888 aa16.68■□□□□ 0.26
PCDHGA3-202ENST00000612467 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 ITGA6P23229 1130 aa16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 FUCA2Q9BTY2 467 aa16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
PCDHGA3-202ENST00000612467 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 CIAO1O76071 339 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 LDHAL6AQ6ZMR3 332 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 531.8 ms