RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 SLC27A2O14975 620 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 TET3O43151 1660 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CPA1P15085 419 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CPLX3Q8WVH0 158 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CTAGE1Q96RT6 745 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 SLC26A6Q9BXS9 759 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 BMP15O95972 392 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 UQCRFS1P1P0C7P4 283 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 ISM2Q6H9L7 571 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 CFAP74Q9C0B2 1584 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 ZBTB43O43298 467 aa12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 GTF2F1P35269 517 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDC42EP3-206ENST00000611976 USP19O94966 1318 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 MFSD6Q6ZSS7 791 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 TAF4BQ92750 862 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 SHTN1A0MZ66 631 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 KRT28Q7Z3Y7 464 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 SKIDA1Q1XH10 827 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 TIGD1Q96MW7 591 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 KRT23Q9C075 422 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 ARFGAP3Q9NP61 516 aa12.55□□□□□ -0.4
CDC42EP3-206ENST00000611976 PRC1O43663 620 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 APOBRQ0VD83 1088 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 GPT2Q8TD30 523 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 LAMC1P11047 1609 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 ZNF75DP51815 510 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 SYCP1Q15431 976 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 ATP7BP35670 1465 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
CDC42EP3-206ENST00000611976 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 TUBB4BP68371 445 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 NLRP5P59047 1200 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 SPAG1Q07617 926 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 TFCP2Q12800 502 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 CBX8Q9HC52 389 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 IP6K1Q92551 441 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 TSG101Q99816 390 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 ZNF652Q9Y2D9 606 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 MAP3K4Q9Y6R4 1608 aa12.53□□□□□ -0.4
CDC42EP3-206ENST00000611976 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.4
CDC42EP3-206ENST00000611976 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.4
CDC42EP3-206ENST00000611976 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.4
CDC42EP3-206ENST00000611976 SSH3Q8TE77 659 aa12.52□□□□□ -0.4
CDC42EP3-206ENST00000611976 IFNKQ9P0W0 207 aa12.52□□□□□ -0.4
CDC42EP3-206ENST00000611976 PKP1Q13835 747 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 WTAPQ15007 396 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 ZHX3Q9H4I2 956 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 CCDC175P0C221 793 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 MARCKSP29966 332 aaPredicted RBP12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 ATP2B3Q16720 1220 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 CEP112Q8N8E3 955 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 SIRT1Q96EB6 747 aa12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
CDC42EP3-206ENST00000611976 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
CDC42EP3-206ENST00000611976 N4BP3O15049 544 aa12.51□□□□□ -0.41
CDC42EP3-206ENST00000611976 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CDC42EP3-206ENST00000611976 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
CDC42EP3-206ENST00000611976 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
CDC42EP3-206ENST00000611976 CENPHQ9H3R5 247 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms