RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 ZFYVE16Q7Z3T8 1539 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
CDH1-212ENST00000611625 ZNF853P0CG23 659 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 SIRT2Q8IXJ6 389 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 MARCKSP29966 332 aaPredicted RBP14.34□□□□□ -0.11
CDH1-212ENST00000611625 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 TXLNBQ8N3L3 684 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
CDH1-212ENST00000611625 DTNBO60941 627 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 UQCRFS1P1P0C7P4 283 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 SIRT1Q96EB6 747 aa14.34□□□□□ -0.11
CDH1-212ENST00000611625 ATP2B2Q01814 1243 aa14.33□□□□□ -0.11
CDH1-212ENST00000611625 IQCEQ6IPM2 695 aa14.33□□□□□ -0.11
CDH1-212ENST00000611625 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.11
CDH1-212ENST00000611625 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 TMX1Q9H3N1 280 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 GNG11P61952 73 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 KANK3Q6NY19 840 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 CTDP1Q9Y5B0 961 aaPredicted RBP14.33□□□□□ -0.12
CDH1-212ENST00000611625 LRRIQ1Q96JM4 1722 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 IBTKQ9P2D0 1353 aaPredicted RBP14.33□□□□□ -0.12
CDH1-212ENST00000611625 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 TERF1P54274 439 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 EIF4A1P60842 406 aaKnown RBP14.33□□□□□ -0.12
CDH1-212ENST00000611625 GPT2Q8TD30 523 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 ZHX3Q9H4I2 956 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.12
CDH1-212ENST00000611625 ATP7BP35670 1465 aa14.33□□□□□ -0.12
CDH1-212ENST00000611625 H0YHG0 523 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 SSBP05455 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDH1-212ENST00000611625 LMOD1P29536 600 aaPredicted RBP14.32□□□□□ -0.12
CDH1-212ENST00000611625 TAF3Q5VWG9 929 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 MAP3K4Q9Y6R4 1608 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 CCDC129Q6ZRS4 1044 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 BMS1Q14692 1282 aaKnown RBP14.32□□□□□ -0.12
CDH1-212ENST00000611625 SLC9C2Q5TAH2 1124 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
CDH1-212ENST00000611625 CHAMP1Q96JM3 812 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 TNNI3KQ59H18 835 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 DBNDD2Q9BQY9 259 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 FPGT-TNNI3KV9GXZ4 949 aa14.32□□□□□ -0.12
CDH1-212ENST00000611625 NLRP5P59047 1200 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 CT47A1Q5JQC4 288 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 POLR3GO15318 223 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 WTAPQ15007 396 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 DNAI1Q9UI46 699 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 ZNF790Q6PG37 636 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 DCAF5Q96JK2 942 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 CCDC94Q9BW85 323 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 FAM193AP78312 1265 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 FAM160A1Q05DH4 1040 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 CADPS2Q86UW7 1296 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 KRT222Q8N1A0 295 aa14.31□□□□□ -0.12
CDH1-212ENST00000611625 LEO1Q8WVC0 666 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
CDH1-212ENST00000611625 CDC37L1Q7L3B6 337 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 C17orf53Q8N3J3 647 aaPredicted RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 MKNK2Q9HBH9 465 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 SLU7O95391 586 aaKnown RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 USP5P45974 858 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 HSP90AA4PQ58FG1 418 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 BRAPQ7Z569 592 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 ZNF397Q8NF99 534 aaPredicted RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 HELLSQ9NRZ9 838 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 RGS12O14924 1447 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 MLH3Q9UHC1 1453 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 STAP2Q9UGK3 403 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDH1-212ENST00000611625 V9GYY5 206 aaPredicted RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 YEATS4O95619 227 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
CDH1-212ENST00000611625 KRT23Q9C075 422 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 PTCH1Q13635 1447 aa14.3□□□□□ -0.12
CDH1-212ENST00000611625 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 CCDC12Q8WUD4 166 aaPredicted RBP14.29□□□□□ -0.12
CDH1-212ENST00000611625 MYO6Q9UM54 1294 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 EFCAB6Q5THR3 1501 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 MADDQ8WXG6 1647 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 RTN1Q16799 776 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 CRACR2AQ9BSW2 395 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 CBX8Q9HC52 389 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 IFNKQ9P0W0 207 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms