RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RGL2O15211 777 aa23.23■■□□□ 1.31
TUBB4B-202ENST00000604929 TAF5LO75529 589 aa23.23■■□□□ 1.31
TUBB4B-202ENST00000604929 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
TUBB4B-202ENST00000604929 VGLL2Q8N8G2 317 aa23.23■■□□□ 1.31
TUBB4B-202ENST00000604929 SLKQ9H2G2 1235 aaPredicted RBP23.23■■□□□ 1.31
TUBB4B-202ENST00000604929 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 APBA3O96018 575 aa23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 TTC39AQ5SRH9 613 aa23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
TUBB4B-202ENST00000604929 SNAP23O00161 211 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 HIP1O00291 1037 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 MCCP23508 829 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 IGHMBP2P38935 993 aaKnown RBP23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 FKBP4Q02790 459 aaKnown RBP eCLIP23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 RABEP1Q15276 862 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 SNX21Q969T3 373 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 A0A0D9SFI3 127 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 NPHP1O15259 732 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 PAG1Q9NWQ8 432 aa23.21■■□□□ 1.31
TUBB4B-202ENST00000604929 MROH5Q6ZUA9 1318 aa23.2■■□□□ 1.3
TUBB4B-202ENST00000604929 PTH1RQ03431 593 aa23.2■■□□□ 1.3
TUBB4B-202ENST00000604929 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
TUBB4B-202ENST00000604929 ANTXR1Q9H6X2 564 aa23.2■■□□□ 1.3
TUBB4B-202ENST00000604929 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
TUBB4B-202ENST00000604929 ABCC12Q96J65 1359 aa23.19■■□□□ 1.3
TUBB4B-202ENST00000604929 NFIXQ14938 502 aa23.19■■□□□ 1.3
TUBB4B-202ENST00000604929 SF3B3Q15393 1217 aaKnown RBP23.19■■□□□ 1.3
TUBB4B-202ENST00000604929 POTEAQ6S8J7 498 aa23.19■■□□□ 1.3
TUBB4B-202ENST00000604929 SCARF1Q14162 830 aa23.18■■□□□ 1.3
TUBB4B-202ENST00000604929 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
TUBB4B-202ENST00000604929 ADRA2BP18089 450 aa23.18■■□□□ 1.3
TUBB4B-202ENST00000604929 SLFNL1Q499Z3 407 aa23.18■■□□□ 1.3
TUBB4B-202ENST00000604929 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
TUBB4B-202ENST00000604929 HSPA4P34932 840 aa23.17■■□□□ 1.3
TUBB4B-202ENST00000604929 RAD50Q92878 1312 aa23.17■■□□□ 1.3
TUBB4B-202ENST00000604929 PI16Q6UXB8 463 aa23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 PUM3Q15397 648 aaKnown RBP23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 ANKRD18AQ8IVF6 992 aa23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 RTL9Q8NET4 1388 aa23.16■■□□□ 1.3
TUBB4B-202ENST00000604929 GYS1P13807 737 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 ZNF589Q86UQ0 364 aaPredicted RBP23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 LPIN2Q92539 896 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 EPB41L2O43491 1005 aaKnown RBP23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 SSFA2P28290 1259 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 ZAP70P43403 619 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 NEK4P51957 841 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 CHRNDQ07001 517 aa23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
TUBB4B-202ENST00000604929 COL4A1P02462 1669 aa23.14■■□□□ 1.29
TUBB4B-202ENST00000604929 PLSCR1O15162 318 aa23.14■■□□□ 1.29
TUBB4B-202ENST00000604929 FGFR2P21802 821 aa23.14■■□□□ 1.29
TUBB4B-202ENST00000604929 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
TUBB4B-202ENST00000604929 C4AP0C0L4 1744 aa23.14■■□□□ 1.29
TUBB4B-202ENST00000604929 TAF1P21675 1872 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 K7ELQ4 463 aaPredicted RBP23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 ANAPC15P60006 121 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 NBR1Q14596 966 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 CCDC102BQ68D86 513 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 CCDC129Q6ZRS4 1044 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 RASEFQ8IZ41 740 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 MCAMP43121 646 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 PHKA1P46020 1223 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 CCDC171Q6TFL3 1326 aa23.13■■□□□ 1.29
TUBB4B-202ENST00000604929 ST18O60284 1047 aa23.12■■□□□ 1.29
TUBB4B-202ENST00000604929 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
TUBB4B-202ENST00000604929 WTIPA6NIX2 430 aaPredicted RBP23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 SLC5A1P13866 664 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 KCNJ4P48050 445 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 SNX14Q9Y5W7 946 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 UBR3Q6ZT12 1888 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 LAMB2P55268 1798 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 ZNF827Q17R98 1081 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 MCMDC2Q4G0Z9 681 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 CNBD1Q8NA66 436 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 MAP4K1Q92918 833 aa23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 BSDC1Q9NW68 430 aaPredicted RBP23.11■■□□□ 1.29
TUBB4B-202ENST00000604929 SPEF2Q9C093 1822 aa23.1■■□□□ 1.29
TUBB4B-202ENST00000604929 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
TUBB4B-202ENST00000604929 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
TUBB4B-202ENST00000604929 RPS8P62241 208 aaKnown RBP23.09■■□□□ 1.29
TUBB4B-202ENST00000604929 MINPP1Q9UNW1 487 aa23.09■■□□□ 1.29
TUBB4B-202ENST00000604929 RBM8AQ9Y5S9 174 aaKnown RBP23.09■■□□□ 1.29
TUBB4B-202ENST00000604929 LRP5O75197 1615 aa23.09■■□□□ 1.29
TUBB4B-202ENST00000604929 MED23Q9ULK4 1368 aa23.09■■□□□ 1.29
TUBB4B-202ENST00000604929 RNF113AO15541 343 aaKnown RBP23.08■■□□□ 1.29
TUBB4B-202ENST00000604929 TM4SF1P30408 202 aa23.08■■□□□ 1.29
TUBB4B-202ENST00000604929 BCAMP50895 628 aa23.08■■□□□ 1.29
TUBB4B-202ENST00000604929 NECTIN1Q15223 517 aa23.08■■□□□ 1.29
TUBB4B-202ENST00000604929 SERPINB2P05120 415 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms