RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ABCA6Q8N139 1617 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 NEBLO76041 1014 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 LDHAP00338 332 aaKnown RBP8.37□□□□□ -1.07
TUBE1-207ENST00000604689 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
TUBE1-207ENST00000604689 MRFAP1Q9Y605 127 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 IFT172Q9UG01 1749 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 PRC1O43663 620 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 DSG3P32926 999 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 LLGL2Q6P1M3 1020 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 VMP1Q96GC9 406 aa8.37□□□□□ -1.07
TUBE1-207ENST00000604689 CWC15Q9P013 229 aaKnown RBP8.37□□□□□ -1.07
TUBE1-207ENST00000604689 SKILP12757 684 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 PRPF4BQ13523 1007 aaKnown RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 NCOA4Q13772 614 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 BECN1Q14457 450 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 CEP126Q9P2H0 1117 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 JMYQ8N9B5 988 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 MYBBP1AQ9BQG0 1328 aaKnown RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 SPATA31E1Q6ZUB1 1445 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 TNFRSF10BO14763 440 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 IL4RP24394 825 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 IL17RAQ96F46 866 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 ASB16Q96NS5 453 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 CDC5LQ99459 802 aaKnown RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 CARD11Q9BXL7 1154 aa8.36□□□□□ -1.07
TUBE1-207ENST00000604689 TRMT1Q9NXH9 659 aaKnown RBP8.36□□□□□ -1.07
TUBE1-207ENST00000604689 USP17L5A8MUK1 530 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 ZSCAN26Q16670 478 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 LONRF1Q17RB8 773 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 MAGI2Q86UL8 1455 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 LILRB3O75022 631 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 DPYDQ12882 1025 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 NYAP1Q6ZVC0 841 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 CCAR1Q8IX12 1150 aaKnown RBP8.35□□□□□ -1.07
TUBE1-207ENST00000604689 C10orf67Q8IYJ2 551 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 ANKRD20A12PQ8NF67 263 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
TUBE1-207ENST00000604689 KLHL33A6NCF5 533 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
TUBE1-207ENST00000604689 DNAJC6O75061 913 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 JAKMIP3Q5VZ66 844 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 RNF34Q969K3 372 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 INTUQ9ULD6 942 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 TNNQ9UQP3 1299 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.35□□□□□ -1.07
TUBE1-207ENST00000604689 IQGAP3Q86VI3 1631 aa8.35□□□□□ -1.07
TUBE1-207ENST00000604689 HIP1RO75146 1068 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 PSMC1P62191 440 aaKnown RBP8.34□□□□□ -1.07
TUBE1-207ENST00000604689 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
TUBE1-207ENST00000604689 TMEM110Q86TL2 294 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 LCA5Q86VQ0 697 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 THOC1Q96FV9 657 aaKnown RBP8.34□□□□□ -1.07
TUBE1-207ENST00000604689 HECW1Q76N89 1606 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 ERCC6L2Q5T890 1561 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 TSPY4P0CV99 314 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 TSPY10P0CW01 314 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 GUCY2CP25092 1073 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 MRE11P49959 708 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 IFT88Q13099 833 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 CHMP5Q9NZZ3 219 aa8.34□□□□□ -1.07
TUBE1-207ENST00000604689 DYNC1I1O14576 645 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 KIF3CO14782 793 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 ZNF76P36508 570 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 GPS2Q13227 327 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.08
TUBE1-207ENST00000604689 NR6A1Q15406 480 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 PPP4R4Q6NUP7 873 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 PGBD3Q8N328 593 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.08
TUBE1-207ENST00000604689 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.08
TUBE1-207ENST00000604689 PPCSQ9HAB8 311 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 BRMS1Q9HCU9 246 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 MED4Q9NPJ6 270 aa8.34□□□□□ -1.08
TUBE1-207ENST00000604689 IGF1RP08069 1367 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 FAM200BP0CF97 657 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 MYCLP1P12525 358 aaPredicted RBP8.33□□□□□ -1.08
TUBE1-207ENST00000604689 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 ARID5AQ03989 594 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 DBN1Q16643 649 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 MCF2L2Q86YR7 1114 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 SYNPO2Q9UMS6 1093 aa8.33□□□□□ -1.08
TUBE1-207ENST00000604689 GCC2Q8IWJ2 1684 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms