RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 MCMDC2Q4G0Z9 681 aa18.07■□□□□ 0.48
CCDC12-211ENST00000604367 CCDC158Q5M9N0 1113 aa18.07■□□□□ 0.48
CCDC12-211ENST00000604367 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
CCDC12-211ENST00000604367 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
CCDC12-211ENST00000604367 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
CCDC12-211ENST00000604367 TM6SF1Q9BZW5 370 aa18.06■□□□□ 0.48
CCDC12-211ENST00000604367 BCL9LQ86UU0 1499 aa18.06■□□□□ 0.48
CCDC12-211ENST00000604367 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
CCDC12-211ENST00000604367 VPS53Q5VIR6 699 aa18.06■□□□□ 0.48
CCDC12-211ENST00000604367 MYH14Q7Z406 1995 aaKnown RBP18.05■□□□□ 0.48
CCDC12-211ENST00000604367 LARGE1O95461 756 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 VPS72Q15906 364 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 RIPOR2Q9Y4F9 1068 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 RFX7Q2KHR2 1363 aa18.05■□□□□ 0.48
CCDC12-211ENST00000604367 JCADQ9P266 1359 aa18.04■□□□□ 0.48
CCDC12-211ENST00000604367 DTNBO60941 627 aa18.04■□□□□ 0.48
CCDC12-211ENST00000604367 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
CCDC12-211ENST00000604367 ATP2B3Q16720 1220 aa18.04■□□□□ 0.48
CCDC12-211ENST00000604367 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
CCDC12-211ENST00000604367 MYH3P11055 1940 aa18.04■□□□□ 0.48
CCDC12-211ENST00000604367 PSMA5P28066 241 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 RPAP1Q9BWH6 1393 aaPredicted RBP18.03■□□□□ 0.48
CCDC12-211ENST00000604367 SCARF1Q14162 830 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 BLOC1S2Q6QNY1 142 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 NIP7Q9Y221 180 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC12-211ENST00000604367 SH3TC1Q8TE82 1336 aa18.03■□□□□ 0.48
CCDC12-211ENST00000604367 BRD1O95696 1058 aa18.02■□□□□ 0.48
CCDC12-211ENST00000604367 PTMSP20962 102 aa18.02■□□□□ 0.48
CCDC12-211ENST00000604367 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.48
CCDC12-211ENST00000604367 SKOR2Q2VWA4 1001 aaPredicted RBP18.02■□□□□ 0.47
CCDC12-211ENST00000604367 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.47
CCDC12-211ENST00000604367 FAM182BQ5T319 152 aa18.02■□□□□ 0.47
CCDC12-211ENST00000604367 PI16Q6UXB8 463 aa18.02■□□□□ 0.47
CCDC12-211ENST00000604367 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.47
CCDC12-211ENST00000604367 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.47
CCDC12-211ENST00000604367 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.47
CCDC12-211ENST00000604367 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.47
CCDC12-211ENST00000604367 USP21Q9UK80 565 aa18.02■□□□□ 0.47
CCDC12-211ENST00000604367 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
CCDC12-211ENST00000604367 DDX49Q9Y6V7 483 aaKnown RBP18.01■□□□□ 0.47
CCDC12-211ENST00000604367 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
CCDC12-211ENST00000604367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCDC12-211ENST00000604367 HELLSQ9NRZ9 838 aa18.01■□□□□ 0.47
CCDC12-211ENST00000604367 RNF113AO15541 343 aaKnown RBP18■□□□□ 0.47
CCDC12-211ENST00000604367 ZAP70P43403 619 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 ME3Q16798 604 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 ZMYM1Q5SVZ6 1142 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
CCDC12-211ENST00000604367 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
CCDC12-211ENST00000604367 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
CCDC12-211ENST00000604367 PRPF40AO75400 957 aaKnown RBP18■□□□□ 0.47
CCDC12-211ENST00000604367 PDE8BO95263 885 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 CYP21A2P08686 494 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 SMIM5Q71RC9 77 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 NECAB1Q8N987 351 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
CCDC12-211ENST00000604367 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
CCDC12-211ENST00000604367 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
CCDC12-211ENST00000604367 MAST3O60307 1309 aa17.99■□□□□ 0.47
CCDC12-211ENST00000604367 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
CCDC12-211ENST00000604367 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
CCDC12-211ENST00000604367 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
CCDC12-211ENST00000604367 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
CCDC12-211ENST00000604367 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 GOLGA6L3A6NEY3 463 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 M0R2C6 588 aa17.98■□□□□ 0.47
CCDC12-211ENST00000604367 MCAMP43121 646 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 OSBP2Q969R2 916 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
CCDC12-211ENST00000604367 SNAP23O00161 211 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 NTSR2O95665 410 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
CCDC12-211ENST00000604367 ST3GAL1Q11201 340 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 KRT32Q14532 448 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 AK7Q96M32 723 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
CCDC12-211ENST00000604367 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
CCDC12-211ENST00000604367 KLHL40Q2TBA0 621 aa17.96■□□□□ 0.47
CCDC12-211ENST00000604367 BRPF3Q9ULD4 1205 aa17.96■□□□□ 0.47
CCDC12-211ENST00000604367 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
CCDC12-211ENST00000604367 RREB1Q92766 1687 aa17.96■□□□□ 0.47
CCDC12-211ENST00000604367 A0A0G2JLW4 131 aa17.96■□□□□ 0.46
CCDC12-211ENST00000604367 GJB2P29033 226 aa17.96■□□□□ 0.46
CCDC12-211ENST00000604367 TOB2Q14106 344 aaPredicted RBP17.96■□□□□ 0.46
CCDC12-211ENST00000604367 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.46
CCDC12-211ENST00000604367 SPEF2Q9C093 1822 aa17.95■□□□□ 0.46
CCDC12-211ENST00000604367 SYT1P21579 422 aa17.95■□□□□ 0.46
CCDC12-211ENST00000604367 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
CCDC12-211ENST00000604367 DSCC1Q9BVC3 393 aa17.95■□□□□ 0.46
CCDC12-211ENST00000604367 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
CCDC12-211ENST00000604367 PHKA1P46020 1223 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms