RNA–Protein interactions for RNA: ENST00000602229.1

C3-218, Transcript of complement C3, human

TSL 2

Gene C3, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C3-218	ENST00000602229	LMNB1	P20700	586 aa		13.18	□□□□□ -0.3
C3-218	ENST00000602229	IL15	P40933	162 aa	Predicted RBP	13.18	□□□□□ -0.3
C3-218	ENST00000602229	C3orf67	Q6ZVT6	689 aa		13.18	□□□□□ -0.3
C3-218	ENST00000602229	CHD1L	Q86WJ1	897 aa		13.18	□□□□□ -0.3
C3-218	ENST00000602229	LAMB2	P55268	1798 aa		13.17	□□□□□ -0.3
C3-218	ENST00000602229	HCLS1	P14317	486 aa	Predicted RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	ITGA6	P23229	1130 aa		13.17	□□□□□ -0.3
C3-218	ENST00000602229	IGHMBP2	P38935	993 aa	Known RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	RFX5	P48382	616 aa	Predicted RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	PTPN12	Q05209	780 aa	Known RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	ANKRD45	Q5TZF3	282 aa		13.17	□□□□□ -0.3
C3-218	ENST00000602229	STYK1	Q6J9G0	422 aa		13.17	□□□□□ -0.3
C3-218	ENST00000602229	DDX46	Q7L014	1031 aa	Known RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	JARID2	Q92833	1246 aa	Predicted RBP	13.17	□□□□□ -0.3
C3-218	ENST00000602229	MASTL	Q96GX5	879 aa		13.17	□□□□□ -0.3
C3-218	ENST00000602229	WDR90	Q96KV7	1748 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	KLRG2	A4D1S0	409 aa	Predicted RBP	13.16	□□□□□ -0.3
C3-218	ENST00000602229	EYA2	O00167	538 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	FAM161A	Q3B820	660 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	LDHAL6A	Q6ZMR3	332 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	TMC4	Q7Z404	712 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	CLASRP	Q8N2M8	674 aa	Known RBP	13.16	□□□□□ -0.3
C3-218	ENST00000602229	MPHOSPH8	Q99549	860 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	AKAP2	Q9Y2D5	859 aa		13.16	□□□□□ -0.3
C3-218	ENST00000602229	CEP350	Q5VT06	3117 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	TOMM70	O94826	608 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	CRY2	Q49AN0	593 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	ANKRD18A	Q8IVF6	992 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	SYNE4	Q8N205	404 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	RHPN1	Q8TCX5	695 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	RPGR	Q92834	1020 aa	Known RBP	13.15	□□□□□ -0.3
C3-218	ENST00000602229	CNKSR1	Q969H4	720 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	GREM2	Q9H772	168 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	GPR108	Q9NPR9	543 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	EXOC6B	Q9Y2D4	811 aa		13.15	□□□□□ -0.3
C3-218	ENST00000602229	MROH5	Q6ZUA9	1318 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	NPR1	P16066	1061 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	C7orf43	Q8WVR3	580 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	RBM17	Q96I25	401 aa	Known RBP	13.14	□□□□□ -0.31
C3-218	ENST00000602229	GPATCH3	Q96I76	525 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	TAOK3	Q9H2K8	898 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.14	□□□□□ -0.31
C3-218	ENST00000602229	CNNM1	Q9NRU3	951 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	CEP126	Q9P2H0	1117 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	COL4A5	P29400	1685 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	TAF1	P21675	1872 aa		13.14	□□□□□ -0.31
C3-218	ENST00000602229	COL4A1	P02462	1669 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	GLTPD2	A6NH11	291 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	POTEC	B2RU33	542 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	BBOX1	O75936	387 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	ALDH1B1	P30837	517 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	HOXA10	P31260	410 aa	Predicted RBP	13.13	□□□□□ -0.31
C3-218	ENST00000602229	CRAMP1	Q96RY5	1269 aa		13.13	□□□□□ -0.31
C3-218	ENST00000602229	TMX4	Q9H1E5	349 aa	Predicted RBP	13.13	□□□□□ -0.31
C3-218	ENST00000602229	BSDC1	Q9NW68	430 aa	Predicted RBP	13.13	□□□□□ -0.31
C3-218	ENST00000602229	RPS8	P62241	208 aa	Known RBP	13.12	□□□□□ -0.31
C3-218	ENST00000602229	GRAP	Q13588	217 aa		13.12	□□□□□ -0.31
C3-218	ENST00000602229	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.12	□□□□□ -0.31
C3-218	ENST00000602229	GRAPL	Q8TC17	118 aa	Predicted RBP	13.12	□□□□□ -0.31
C3-218	ENST00000602229	PA2G4	Q9UQ80	394 aa	Known RBP	13.12	□□□□□ -0.31
C3-218	ENST00000602229	SNED1	Q8TER0	1413 aa		13.12	□□□□□ -0.31
C3-218	ENST00000602229	ZNF541	Q9H0D2	1346 aa		13.12	□□□□□ -0.31
C3-218	ENST00000602229	DDX60	Q8IY21	1712 aa	Known RBP	13.11	□□□□□ -0.31
C3-218	ENST00000602229	DDN	O94850	711 aa	Predicted RBP	13.11	□□□□□ -0.31
C3-218	ENST00000602229	IFIT2	P09913	472 aa	Known RBP	13.11	□□□□□ -0.31
C3-218	ENST00000602229	POTEI	P0CG38	1075 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	POTEJ	P0CG39	1038 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	CCDC93	Q567U6	631 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	RBM46	Q8TBY0	533 aa	Known RBP	13.11	□□□□□ -0.31
C3-218	ENST00000602229	LNPK	Q9C0E8	428 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	ANKRD2	Q9GZV1	360 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	SIL1	Q9H173	461 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	RIPOR2	Q9Y4F9	1068 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	AOX1	Q06278	1338 aa		13.11	□□□□□ -0.31
C3-218	ENST00000602229	ERC2	O15083	957 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	GRIPAP1	Q4V328	841 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	METTL24	Q5JXM2	366 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	ATG9A	Q7Z3C6	839 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.1	□□□□□ -0.31
C3-218	ENST00000602229	TTC41P	Q6P2S7	1318 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	LTBP3	Q9NS15	1303 aa		13.1	□□□□□ -0.31
C3-218	ENST00000602229	APBB1	O00213	710 aa		13.09	□□□□□ -0.31
C3-218	ENST00000602229	EIF5B	O60841	1220 aa	Known RBP	13.09	□□□□□ -0.31
C3-218	ENST00000602229	SASH1	O94885	1247 aa		13.09	□□□□□ -0.31
C3-218	ENST00000602229	PDE8B	O95263	885 aa		13.09	□□□□□ -0.31
C3-218	ENST00000602229	OSBPL3	Q9H4L5	887 aa		13.09	□□□□□ -0.31
C3-218	ENST00000602229	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.09	□□□□□ -0.31
C3-218	ENST00000602229	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
C3-218	ENST00000602229	TFCP2	Q12800	502 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	PUM3	Q15397	648 aa	Known RBP	13.08	□□□□□ -0.32
C3-218	ENST00000602229	TNNI3K	Q59H18	835 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	KLHDC4	Q8TBB5	520 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	ZNF594	Q96JF6	807 aa	Predicted RBP	13.08	□□□□□ -0.32
C3-218	ENST00000602229	SEC31B	Q9NQW1	1179 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	STAP2	Q9UGK3	403 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	FPGT-TNNI3K	V9GXZ4	949 aa		13.08	□□□□□ -0.32
C3-218	ENST00000602229	IFIT1	P09914	478 aa	Known RBP	13.07	□□□□□ -0.32
C3-218	ENST00000602229	VEGFA	P15692	232 aa	Predicted RBP	13.07	□□□□□ -0.32
C3-218	ENST00000602229	MX1	P20591	662 aa		13.07	□□□□□ -0.32
C3-218	ENST00000602229	APLP1	P51693	650 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms