RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TNP2Q05952 138 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 EDEM1Q92611 657 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 ABHD17AQ96GS6 310 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 ATXN7L1Q9ULK2 861 aaPredicted RBP7.3□□□□□ -1.24
VRK3-222ENST00000601324 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 RTCBQ9Y3I0 505 aaKnown RBP7.3□□□□□ -1.24
VRK3-222ENST00000601324 CAMSAP1Q5T5Y3 1602 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 PLA2R1Q13018 1463 aa7.3□□□□□ -1.24
VRK3-222ENST00000601324 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 NPATQ14207 1427 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 PDGFAP04085 211 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 MAPTP10636 758 aaKnown RBP7.29□□□□□ -1.24
VRK3-222ENST00000601324 MAPK1P28482 360 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 VEGFBP49765 207 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 DNM1Q05193 864 aaKnown RBP7.29□□□□□ -1.24
VRK3-222ENST00000601324 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 GPR152Q8TDT2 470 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 CITED4Q96RK1 184 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 KCNH4Q9UQ05 1017 aa7.29□□□□□ -1.24
VRK3-222ENST00000601324 PLEKHD1A6NEE1 506 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
VRK3-222ENST00000601324 RPLP1P05386 114 aaKnown RBP7.28□□□□□ -1.24
VRK3-222ENST00000601324 PCSK2P16519 638 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 GRNP28799 593 aaKnown RBP7.28□□□□□ -1.24
VRK3-222ENST00000601324 USP5P45974 858 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
VRK3-222ENST00000601324 RBCK1Q9BYM8 510 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 C11orf16Q9NQ32 467 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 POLIQ9UNA4 740 aa7.28□□□□□ -1.24
VRK3-222ENST00000601324 CCDC9Q9Y3X0 531 aaKnown RBP7.28□□□□□ -1.24
VRK3-222ENST00000601324 GPR25O00155 361 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 VSIG8P0DPA2 414 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 SFSWAPQ12872 951 aaKnown RBP7.27□□□□□ -1.25
VRK3-222ENST00000601324 GJD3Q8N144 294 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
VRK3-222ENST00000601324 AFAP1Q8N556 730 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 NUDT16Q96DE0 195 aaKnown RBP7.27□□□□□ -1.25
VRK3-222ENST00000601324 STRN4Q9NRL3 753 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 MARK1Q9P0L2 795 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 USP20Q9Y2K6 914 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 MLH3Q9UHC1 1453 aa7.27□□□□□ -1.25
VRK3-222ENST00000601324 FGFR3P22607 806 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 PDE3BQ13370 1112 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 FAM182BQ5T319 152 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 SLC16A10Q8TF71 515 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 HCN2Q9UL51 889 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 FNDC3AQ9Y2H6 1198 aaKnown RBP7.26□□□□□ -1.25
VRK3-222ENST00000601324 KCNMB2Q9Y691 235 aa7.26□□□□□ -1.25
VRK3-222ENST00000601324 ZNF518AQ6AHZ1 1483 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 XYLBO75191 536 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 EGFRP00533 1210 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 CD33P20138 364 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 TRIP4Q15650 581 aaPredicted RBP7.25□□□□□ -1.25
VRK3-222ENST00000601324 DNAJC14Q6Y2X3 702 aaPredicted RBP7.25□□□□□ -1.25
VRK3-222ENST00000601324 ZSCAN29Q8IWY8 852 aaPredicted RBP7.25□□□□□ -1.25
VRK3-222ENST00000601324 TTC16Q8NEE8 873 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 ASB16Q96NS5 453 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 FAM129BQ96TA1 746 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 ABCA6Q8N139 1617 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 CNTLNQ9NXG0 1405 aa7.25□□□□□ -1.25
VRK3-222ENST00000601324 EHHADHQ08426 723 aa7.24□□□□□ -1.25
VRK3-222ENST00000601324 CCINQ13939 588 aa7.24□□□□□ -1.25
VRK3-222ENST00000601324 GAS6Q14393 721 aa7.24□□□□□ -1.25
VRK3-222ENST00000601324 GPR161Q8N6U8 529 aaKnown RBP7.24□□□□□ -1.25
VRK3-222ENST00000601324 DMRTB1Q96MA1 342 aa7.24□□□□□ -1.25
VRK3-222ENST00000601324 GGNBP2Q9H3C7 697 aa7.24□□□□□ -1.25
VRK3-222ENST00000601324 ZNF142P52746 1687 aaPredicted RBP7.24□□□□□ -1.25
VRK3-222ENST00000601324 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 CTBSQ01459 385 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 SPEM2Q0P670 501 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 NFX1Q12986 1120 aaKnown RBP7.23□□□□□ -1.25
VRK3-222ENST00000601324 C8orf34Q49A92 452 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 EFCAB2Q5VUJ9 269 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 PDE12Q6L8Q7 609 aaKnown RBP7.23□□□□□ -1.25
VRK3-222ENST00000601324 TMC7Q7Z402 723 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 TMC1Q8TDI8 760 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 IRF7Q92985 503 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 EFCC1Q9HA90 598 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 PTPRKQ15262 1439 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 ERBB4Q15303 1308 aa7.23□□□□□ -1.25
VRK3-222ENST00000601324 MROH2AA6NES4 1674 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 CPS1P31327 1500 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
VRK3-222ENST00000601324 NEURL4Q96JN8 1562 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 IGHA2P01877 340 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 ERCC3P19447 782 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 GRIN2CQ14957 1233 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 XKR5Q6UX68 686 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
VRK3-222ENST00000601324 VWDEQ8N2E2 1590 aa7.21□□□□□ -1.25
VRK3-222ENST00000601324 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
VRK3-222ENST00000601324 A6NHS1 94 aa7.21□□□□□ -1.26
VRK3-222ENST00000601324 GPR182O15218 404 aa7.21□□□□□ -1.26
VRK3-222ENST00000601324 TOM1O60784 492 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms