RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
VRK3-221ENST00000600284 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
VRK3-221ENST00000600284 RTL9Q8NET4 1388 aa20.19■□□□□ 0.82
VRK3-221ENST00000600284 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
VRK3-221ENST00000600284 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
VRK3-221ENST00000600284 DBNDD1Q9H9R9 158 aa20.18■□□□□ 0.82
VRK3-221ENST00000600284 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
VRK3-221ENST00000600284 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
VRK3-221ENST00000600284 H7C1D1 291 aa20.17■□□□□ 0.82
VRK3-221ENST00000600284 PSMD14O00487 310 aa20.17■□□□□ 0.82
VRK3-221ENST00000600284 ECE2O60344 883 aa20.17■□□□□ 0.82
VRK3-221ENST00000600284 UFL1O94874 794 aa20.17■□□□□ 0.82
VRK3-221ENST00000600284 RPS12P25398 132 aaKnown RBP20.17■□□□□ 0.82
VRK3-221ENST00000600284 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
VRK3-221ENST00000600284 XDHP47989 1333 aa20.17■□□□□ 0.82
VRK3-221ENST00000600284 RASSF10A6NK89 507 aa20.16■□□□□ 0.82
VRK3-221ENST00000600284 ATP2B4P23634 1241 aa20.16■□□□□ 0.82
VRK3-221ENST00000600284 UBE3BQ7Z3V4 1068 aa20.16■□□□□ 0.82
VRK3-221ENST00000600284 G3V3G9 751 aa20.15■□□□□ 0.82
VRK3-221ENST00000600284 HSPA1AP0DMV8 641 aaKnown RBP20.15■□□□□ 0.82
VRK3-221ENST00000600284 HSPA1BP0DMV9 641 aaKnown RBP20.15■□□□□ 0.82
VRK3-221ENST00000600284 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
VRK3-221ENST00000600284 DEFB115Q30KQ5 88 aa20.15■□□□□ 0.82
VRK3-221ENST00000600284 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
VRK3-221ENST00000600284 GREM2Q9H772 168 aa20.15■□□□□ 0.82
VRK3-221ENST00000600284 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
VRK3-221ENST00000600284 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
VRK3-221ENST00000600284 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
VRK3-221ENST00000600284 CASP7P55210 303 aa20.14■□□□□ 0.81
VRK3-221ENST00000600284 MICALL2Q8IY33 904 aa20.14■□□□□ 0.81
VRK3-221ENST00000600284 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
VRK3-221ENST00000600284 PCNTO95613 3336 aa20.14■□□□□ 0.81
VRK3-221ENST00000600284 CSF1RP07333 972 aa20.13■□□□□ 0.81
VRK3-221ENST00000600284 VEGFBP49765 207 aa20.13■□□□□ 0.81
VRK3-221ENST00000600284 GPR101Q96P66 508 aaPredicted RBP20.13■□□□□ 0.81
VRK3-221ENST00000600284 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
VRK3-221ENST00000600284 MINPP1Q9UNW1 487 aa20.13■□□□□ 0.81
VRK3-221ENST00000600284 IGHMBP2P38935 993 aaKnown RBP20.12■□□□□ 0.81
VRK3-221ENST00000600284 TRPM4Q8TD43 1214 aa20.12■□□□□ 0.81
VRK3-221ENST00000600284 ABT1Q9ULW3 272 aaKnown RBP20.12■□□□□ 0.81
VRK3-221ENST00000600284 TRAF5O00463 557 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 BEND3Q5T5X7 828 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 CST9Q5W186 159 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 CDC37L1Q7L3B6 337 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 PODNQ7Z5L7 613 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 MYH3P11055 1940 aa20.11■□□□□ 0.81
VRK3-221ENST00000600284 ITGA6P23229 1130 aa20.1■□□□□ 0.81
VRK3-221ENST00000600284 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
VRK3-221ENST00000600284 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
VRK3-221ENST00000600284 CCT4P50991 539 aaKnown RBP20.09■□□□□ 0.81
VRK3-221ENST00000600284 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
VRK3-221ENST00000600284 AGBL3Q8NEM8 1001 aa20.09■□□□□ 0.81
VRK3-221ENST00000600284 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
VRK3-221ENST00000600284 ZNF609O15014 1411 aa20.09■□□□□ 0.81
VRK3-221ENST00000600284 MED23Q9ULK4 1368 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 F6X3S4 739 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 GLIS2Q9BZE0 524 aaPredicted RBP20.08■□□□□ 0.81
VRK3-221ENST00000600284 ANKRD2Q9GZV1 360 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 TLL2Q9Y6L7 1015 aa20.08■□□□□ 0.81
VRK3-221ENST00000600284 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
VRK3-221ENST00000600284 ECE1P42892 770 aa20.07■□□□□ 0.8
VRK3-221ENST00000600284 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
VRK3-221ENST00000600284 TBC1D10BQ4KMP7 808 aaPredicted RBP20.07■□□□□ 0.8
VRK3-221ENST00000600284 RSBN1LQ6PCB5 846 aaPredicted RBP20.07■□□□□ 0.8
VRK3-221ENST00000600284 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
VRK3-221ENST00000600284 ANKRD18BA2A2Z9 1011 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 USP17L3A6NCW0 530 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 USP17L4A6NCW7 530 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 E9PSI1 815 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 CELF2O95319 508 aaKnown RBP20.06■□□□□ 0.8
VRK3-221ENST00000600284 USP17L1Q7RTZ2 530 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
VRK3-221ENST00000600284 GRM8O00222 908 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 ZNF280AP59817 542 aaPredicted RBP20.05■□□□□ 0.8
VRK3-221ENST00000600284 FOXO4P98177 505 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 MAP2K1Q02750 393 aaPredicted RBP20.05■□□□□ 0.8
VRK3-221ENST00000600284 KIF4BQ2VIQ3 1234 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 AIDAQ96BJ3 306 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 COA1Q9GZY4 146 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 WBP1LQ9NX94 342 aa20.05■□□□□ 0.8
VRK3-221ENST00000600284 SCN9AQ15858 1988 aa20.04■□□□□ 0.8
VRK3-221ENST00000600284 WTIPA6NIX2 430 aaPredicted RBP20.04■□□□□ 0.8
VRK3-221ENST00000600284 EGFRP00533 1210 aa20.04■□□□□ 0.8
VRK3-221ENST00000600284 IFIT5Q13325 482 aaKnown RBP20.04■□□□□ 0.8
VRK3-221ENST00000600284 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
VRK3-221ENST00000600284 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
VRK3-221ENST00000600284 GMLQ99445 158 aa20.04■□□□□ 0.8
VRK3-221ENST00000600284 SRCIN1Q9C0H9 1055 aa20.04■□□□□ 0.8
VRK3-221ENST00000600284 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
VRK3-221ENST00000600284 RBM26Q5T8P6 1007 aaKnown RBP20.03■□□□□ 0.8
VRK3-221ENST00000600284 CAPNS2Q96L46 248 aa20.03■□□□□ 0.8
VRK3-221ENST00000600284 C9orf78Q9NZ63 289 aaPredicted RBP20.03■□□□□ 0.8
VRK3-221ENST00000600284 FOXN1O15353 648 aa20.02■□□□□ 0.8
VRK3-221ENST00000600284 USP17L8P0C7I0 530 aa20.02■□□□□ 0.8
VRK3-221ENST00000600284 MMP14P50281 582 aa20.02■□□□□ 0.8
VRK3-221ENST00000600284 CHRNDQ07001 517 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms