RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
CEACAM1-213ENST00000599389 H0YGN5 161 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 SREBF2Q12772 1141 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 PARP10Q53GL7 1025 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 ANGEL2Q5VTE6 544 aaKnown RBP9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 PHACTR3Q96KR7 559 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 POLR3GLQ9BT43 218 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 KCNQ5Q9NR82 932 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 TRIM17Q9Y577 477 aa9.48□□□□□ -0.89
CEACAM1-213ENST00000599389 VIL1P09327 827 aaKnown RBP9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 GRAPQ13588 217 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 KIF6Q6ZMV9 814 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 GRAPLQ8TC17 118 aaPredicted RBP9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 ZNF333Q96JL9 665 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 PTPN22Q9Y2R2 807 aa9.47□□□□□ -0.89
CEACAM1-213ENST00000599389 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.89
CEACAM1-213ENST00000599389 UBE2Q2LH0YL09 131 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 ECE2O60344 883 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 CAP1Q01518 475 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 PPP1R42Q7Z4L9 355 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 NECTIN2Q92692 538 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
CEACAM1-213ENST00000599389 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 SCARF1Q14162 830 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 MCM10Q7L590 875 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 GMLQ99445 158 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 UTP14AQ9BVJ6 771 aaKnown RBP9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 POLLQ9UGP5 575 aa9.45□□□□□ -0.9
CEACAM1-213ENST00000599389 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
CEACAM1-213ENST00000599389 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
CEACAM1-213ENST00000599389 ERBB4Q15303 1308 aa9.44□□□□□ -0.9
CEACAM1-213ENST00000599389 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 HCLS1P14317 486 aaPredicted RBP9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 LDLRAD1Q5T700 205 aa9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 IFNL1Q8IU54 200 aa9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 AGBL3Q8NEM8 1001 aa9.43□□□□□ -0.9
CEACAM1-213ENST00000599389 OTOFQ9HC10 1997 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 HTATSF1O43719 755 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 CD99L2Q8TCZ2 262 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 MYOZ2Q9NPC6 264 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 ZSWIM8A7E2V4 1837 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 SSC5DA1L4H1 1573 aa9.42□□□□□ -0.9
CEACAM1-213ENST00000599389 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 RIMBP2O15034 1052 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 MYL6BP14649 208 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 EIF4A1P60842 406 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 GPSM2P81274 684 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 TAF7Q15545 349 aaPredicted RBP9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 PRAMEF18Q5VWM3 479 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 NLRP10Q86W26 655 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 CELF1Q92879 486 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 EFCC1Q9HA90 598 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 SCAF8Q9UPN6 1271 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 RRP7AQ9Y3A4 280 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-213ENST00000599389 A0A1W2PPC1 479 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 MANSC4A6NHS7 340 aaPredicted RBP9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 SOX1O00570 391 aaPredicted RBP9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 INHBEP58166 350 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 PDIA6Q15084 440 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 EYA3Q99504 573 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 NSFL1CQ9UNZ2 370 aaKnown RBP9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 COL1A1P02452 1464 aaPredicted RBP9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 SH3TC1Q8TE82 1336 aa9.4□□□□□ -0.9
CEACAM1-213ENST00000599389 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 ZBTB48P10074 688 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 HSPA5P11021 654 aaKnown RBP9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 CRHR2Q13324 411 aa9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 TCIRG1Q13488 830 aa9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 SF3B3Q15393 1217 aaKnown RBP9.39□□□□□ -0.91
CEACAM1-213ENST00000599389 NBPF9Q3BBW0 867 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms