RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 HDAC5Q9UQL6 1122 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 LARGE1O95461 756 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 TEX35Q5T0J7 233 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 ANKRD13DQ6ZTN6 518 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
TRPM4-209ENST00000598502 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 MRVI1Q9Y6F6 885 aa18.24■□□□□ 0.51
TRPM4-209ENST00000598502 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
TRPM4-209ENST00000598502 PDIA6Q15084 440 aa18.23■□□□□ 0.51
TRPM4-209ENST00000598502 ERCC6LQ2NKX8 1250 aa18.23■□□□□ 0.51
TRPM4-209ENST00000598502 NEK11Q8NG66 645 aa18.23■□□□□ 0.51
TRPM4-209ENST00000598502 RUFY3Q7L099 469 aa18.23■□□□□ 0.51
TRPM4-209ENST00000598502 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 TTC41PQ6P2S7 1318 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 MORC2Q9Y6X9 1032 aaPredicted RBP18.22■□□□□ 0.51
TRPM4-209ENST00000598502 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 NEURL1BA8MQ27 555 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 PPFIA3O75145 1194 aa18.22■□□□□ 0.51
TRPM4-209ENST00000598502 A0A087WZG4 1122 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 H3BQV1 296 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 CYP27B1O15528 508 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 HNRNPH2P55795 449 aaKnown RBP18.21■□□□□ 0.51
TRPM4-209ENST00000598502 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 CYP46A1Q9Y6A2 500 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
TRPM4-209ENST00000598502 GCKRQ14397 625 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 SLU7O95391 586 aaKnown RBP18.21■□□□□ 0.51
TRPM4-209ENST00000598502 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 MTMR6Q9Y217 621 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
TRPM4-209ENST00000598502 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
TRPM4-209ENST00000598502 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
TRPM4-209ENST00000598502 TOM1L2Q6ZVM7 507 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 EVI5LQ96CN4 794 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 CHGBP05060 677 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
TRPM4-209ENST00000598502 C10orf67Q8IYJ2 551 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 ERCC4Q92889 916 aaPredicted RBP18.2■□□□□ 0.5
TRPM4-209ENST00000598502 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
TRPM4-209ENST00000598502 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
TRPM4-209ENST00000598502 SMC2O95347 1197 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 MTX1Q13505 466 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 SKIDA1Q1XH10 827 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 A0A0D9SFI3 127 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 NRDCO43847 1150 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
TRPM4-209ENST00000598502 ARHGAP29Q52LW3 1261 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 DDX11Q96FC9 970 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 SYT10Q6XYQ8 523 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
TRPM4-209ENST00000598502 CCDC85AQ96PX6 553 aaPredicted RBP18.19■□□□□ 0.5
TRPM4-209ENST00000598502 TFCP2Q12800 502 aa18.18■□□□□ 0.5
TRPM4-209ENST00000598502 UBXN4Q92575 508 aa18.18■□□□□ 0.5
TRPM4-209ENST00000598502 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
TRPM4-209ENST00000598502 ZBTB3Q9H5J0 574 aa18.18■□□□□ 0.5
TRPM4-209ENST00000598502 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
TRPM4-209ENST00000598502 TMCO3Q6UWJ1 677 aa18.18■□□□□ 0.5
TRPM4-209ENST00000598502 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
TRPM4-209ENST00000598502 KAT6BQ8WYB5 2073 aa18.17■□□□□ 0.5
TRPM4-209ENST00000598502 ERO1AQ96HE7 468 aa18.17■□□□□ 0.5
TRPM4-209ENST00000598502 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
TRPM4-209ENST00000598502 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
TRPM4-209ENST00000598502 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
TRPM4-209ENST00000598502 ARGLU1Q9NWB6 273 aaPredicted RBP18.17■□□□□ 0.5
TRPM4-209ENST00000598502 TCHHQ07283 1943 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 A0A0G2JS52 829 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 NR1I2O75469 434 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 LMBR1LQ6UX01 489 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 CCDC129Q6ZRS4 1044 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 A1BGP04217 495 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 IRX3P78415 501 aaPredicted RBP18.16■□□□□ 0.5
TRPM4-209ENST00000598502 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
TRPM4-209ENST00000598502 CCDC34Q96HJ3 373 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
TRPM4-209ENST00000598502 LRRC8AQ8IWT6 810 aa18.15■□□□□ 0.5
TRPM4-209ENST00000598502 TTC14Q96N46 770 aa18.15■□□□□ 0.5
TRPM4-209ENST00000598502 URI1O94763 535 aaPredicted RBP18.15■□□□□ 0.5
TRPM4-209ENST00000598502 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
TRPM4-209ENST00000598502 ZNF589Q86UQ0 364 aaPredicted RBP18.15■□□□□ 0.5
TRPM4-209ENST00000598502 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
TRPM4-209ENST00000598502 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
TRPM4-209ENST00000598502 GPS2Q13227 327 aa18.14■□□□□ 0.5
TRPM4-209ENST00000598502 DBNDD2Q9BQY9 259 aa18.14■□□□□ 0.5
TRPM4-209ENST00000598502 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
TRPM4-209ENST00000598502 SLFNL1Q499Z3 407 aa18.14■□□□□ 0.49
TRPM4-209ENST00000598502 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
TRPM4-209ENST00000598502 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.49
TRPM4-209ENST00000598502 RSPH14Q9UHP6 348 aa18.14■□□□□ 0.49
TRPM4-209ENST00000598502 MEGF6O75095 1541 aa18.14■□□□□ 0.49
TRPM4-209ENST00000598502 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
TRPM4-209ENST00000598502 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
TRPM4-209ENST00000598502 DDX19AQ9NUU7 478 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms