RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 BSDC1Q9NW68 430 aaPredicted RBP18.54■□□□□ 0.56
XRCC1-208ENST00000598422 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
XRCC1-208ENST00000598422 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
XRCC1-208ENST00000598422 SCN4AP35499 1836 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 GRM8O00222 908 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 ITGA6P23229 1130 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 ATP2B4P23634 1241 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 CASP7P55210 303 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
XRCC1-208ENST00000598422 USP50Q70EL3 339 aaPredicted RBP18.53■□□□□ 0.56
XRCC1-208ENST00000598422 KLRG1Q96E93 195 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 MPHOSPH8Q99549 860 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
XRCC1-208ENST00000598422 ADARB2Q9NS39 739 aaKnown RBP18.53■□□□□ 0.56
XRCC1-208ENST00000598422 C9orf78Q9NZ63 289 aaPredicted RBP18.53■□□□□ 0.56
XRCC1-208ENST00000598422 CEP350Q5VT06 3117 aa18.52■□□□□ 0.56
XRCC1-208ENST00000598422 ALDH1L1O75891 902 aa18.52■□□□□ 0.56
XRCC1-208ENST00000598422 MAP1SQ66K74 1059 aaPredicted RBP18.52■□□□□ 0.56
XRCC1-208ENST00000598422 DNAJC5GQ8N7S2 189 aa18.52■□□□□ 0.56
XRCC1-208ENST00000598422 PTPRCP08575 1304 aa18.51■□□□□ 0.55
XRCC1-208ENST00000598422 ANKRD18BA2A2Z9 1011 aa18.51■□□□□ 0.55
XRCC1-208ENST00000598422 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
XRCC1-208ENST00000598422 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
XRCC1-208ENST00000598422 SSH1Q8WYL5 1049 aa18.51■□□□□ 0.55
XRCC1-208ENST00000598422 CREBZFQ9NS37 354 aa18.51■□□□□ 0.55
XRCC1-208ENST00000598422 PSMD14O00487 310 aa18.5■□□□□ 0.55
XRCC1-208ENST00000598422 IFIT5Q13325 482 aaKnown RBP18.5■□□□□ 0.55
XRCC1-208ENST00000598422 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
XRCC1-208ENST00000598422 MINPP1Q9UNW1 487 aa18.5■□□□□ 0.55
XRCC1-208ENST00000598422 TAF1P21675 1872 aa18.5■□□□□ 0.55
XRCC1-208ENST00000598422 H7C1D1 291 aa18.49■□□□□ 0.55
XRCC1-208ENST00000598422 CSF1RP07333 972 aa18.49■□□□□ 0.55
XRCC1-208ENST00000598422 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
XRCC1-208ENST00000598422 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
XRCC1-208ENST00000598422 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
XRCC1-208ENST00000598422 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
XRCC1-208ENST00000598422 RPS12P25398 132 aaKnown RBP18.48■□□□□ 0.55
XRCC1-208ENST00000598422 KCNJ4P48050 445 aa18.48■□□□□ 0.55
XRCC1-208ENST00000598422 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
XRCC1-208ENST00000598422 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
XRCC1-208ENST00000598422 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
XRCC1-208ENST00000598422 ANKRD2Q9GZV1 360 aa18.48■□□□□ 0.55
XRCC1-208ENST00000598422 CNOT7Q9UIV1 285 aaKnown RBP18.48■□□□□ 0.55
XRCC1-208ENST00000598422 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 LTBP1Q14766 1721 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 TMEM88BA6NKF7 163 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
XRCC1-208ENST00000598422 FOXO4P98177 505 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 LMBR1LQ6UX01 489 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 DPF2Q92785 391 aa18.47■□□□□ 0.55
XRCC1-208ENST00000598422 CCDC57Q2TAC2 916 aa18.46■□□□□ 0.55
XRCC1-208ENST00000598422 MIER1Q8N108 512 aa18.46■□□□□ 0.55
XRCC1-208ENST00000598422 LEMD3Q9Y2U8 911 aa18.46■□□□□ 0.55
XRCC1-208ENST00000598422 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
XRCC1-208ENST00000598422 TRPM4Q8TD43 1214 aa18.45■□□□□ 0.54
XRCC1-208ENST00000598422 KCNQ5Q9NR82 932 aa18.45■□□□□ 0.54
XRCC1-208ENST00000598422 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
XRCC1-208ENST00000598422 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
XRCC1-208ENST00000598422 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
XRCC1-208ENST00000598422 CHRNDQ07001 517 aa18.44■□□□□ 0.54
XRCC1-208ENST00000598422 EPHA10Q5JZY3 1008 aa18.44■□□□□ 0.54
XRCC1-208ENST00000598422 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
XRCC1-208ENST00000598422 MKRN1Q9UHC7 482 aaKnown RBP18.44■□□□□ 0.54
XRCC1-208ENST00000598422 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
XRCC1-208ENST00000598422 VIL1P09327 827 aaKnown RBP18.43■□□□□ 0.54
XRCC1-208ENST00000598422 JMYQ8N9B5 988 aa18.43■□□□□ 0.54
XRCC1-208ENST00000598422 ZC3H15Q8WU90 426 aaKnown RBP18.43■□□□□ 0.54
XRCC1-208ENST00000598422 FBXW7Q969H0 707 aa18.43■□□□□ 0.54
XRCC1-208ENST00000598422 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
XRCC1-208ENST00000598422 CNNM1Q9NRU3 951 aa18.43■□□□□ 0.54
XRCC1-208ENST00000598422 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
XRCC1-208ENST00000598422 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
XRCC1-208ENST00000598422 NBPF7P0C2Y1 421 aaPredicted RBP18.42■□□□□ 0.54
XRCC1-208ENST00000598422 TBC1D10BQ4KMP7 808 aaPredicted RBP18.42■□□□□ 0.54
XRCC1-208ENST00000598422 RSBN1LQ6PCB5 846 aaPredicted RBP18.42■□□□□ 0.54
XRCC1-208ENST00000598422 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
XRCC1-208ENST00000598422 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
XRCC1-208ENST00000598422 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
XRCC1-208ENST00000598422 ABT1Q9ULW3 272 aaKnown RBP18.42■□□□□ 0.54
XRCC1-208ENST00000598422 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
XRCC1-208ENST00000598422 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
XRCC1-208ENST00000598422 RBM26Q5T8P6 1007 aaKnown RBP18.41■□□□□ 0.54
XRCC1-208ENST00000598422 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
XRCC1-208ENST00000598422 AGBL3Q8NEM8 1001 aa18.41■□□□□ 0.54
XRCC1-208ENST00000598422 UTYO14607 1347 aa18.41■□□□□ 0.54
XRCC1-208ENST00000598422 TRAF5O00463 557 aa18.4■□□□□ 0.54
XRCC1-208ENST00000598422 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
XRCC1-208ENST00000598422 KIF4BQ2VIQ3 1234 aa18.4■□□□□ 0.54
XRCC1-208ENST00000598422 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
XRCC1-208ENST00000598422 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
XRCC1-208ENST00000598422 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
XRCC1-208ENST00000598422 MYH3P11055 1940 aa18.4■□□□□ 0.54
XRCC1-208ENST00000598422 CNTNAP1P78357 1384 aa18.4■□□□□ 0.54
XRCC1-208ENST00000598422 TAF5LO75529 589 aa18.39■□□□□ 0.53
XRCC1-208ENST00000598422 KLRK1P26718 216 aa18.39■□□□□ 0.53
XRCC1-208ENST00000598422 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
XRCC1-208ENST00000598422 BICC1Q9H694 974 aaKnown RBP18.39■□□□□ 0.53
XRCC1-208ENST00000598422 PLIN1O60240 522 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms