RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
SHKBP1-213ENST00000597325 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
SHKBP1-213ENST00000597325 TRIOBPQ9H2D6 2365 aa15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 ABCC4O15439 1325 aa15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 LRP10Q7Z4F1 713 aa15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
SHKBP1-213ENST00000597325 SLC10A3P09131 477 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 CXCL9Q07325 125 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 SLC4A10Q6U841 1118 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 TRPM4Q8TD43 1214 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 COLQQ9Y215 455 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-213ENST00000597325 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 F6X3S4 739 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 GMPSP49915 693 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 ITPRIPQ8IWB1 547 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 GBA2Q9HCG7 927 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 TNNQ9UQP3 1299 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
SHKBP1-213ENST00000597325 RLBP1P12271 317 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 CCT4P50991 539 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 GRIPAP1Q4V328 841 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 TTLL7Q6ZT98 887 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 NIM1KQ8IY84 436 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 VCANP13611 3396 aa15.18■□□□□ 0.02
SHKBP1-213ENST00000597325 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 POTEFA5A3E0 1075 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 MVPQ14764 893 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 ZBTB3Q9H5J0 574 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 HDAC9Q9UKV0 1011 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 CEP290O15078 2479 aa15.17■□□□□ 0.02
SHKBP1-213ENST00000597325 RBBP6Q7Z6E9 1792 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 C2orf69Q8N8R5 385 aa15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 POLR2AP24928 1970 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-213ENST00000597325 SHTN1A0MZ66 631 aa15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 INTS3Q68E01 1043 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 ZNRF3Q9ULT6 936 aa15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 ANKRD36CQ5JPF3 1778 aa15.15■□□□□ 0.02
SHKBP1-213ENST00000597325 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 PPIP5K2O43314 1243 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 AOC3Q16853 763 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 HSP90AB3PQ58FF7 597 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 MYD88Q99836 296 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 KIAA0100Q14667 2235 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-213ENST00000597325 ALDH1L1O75891 902 aa15.13■□□□□ 0.01
SHKBP1-213ENST00000597325 RIC1Q4ADV7 1423 aa15.13■□□□□ 0.01
SHKBP1-213ENST00000597325 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
SHKBP1-213ENST00000597325 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHKBP1-213ENST00000597325 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 RGL2O15211 777 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 TBC1D8O95759 1140 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 RASAL3Q86YV0 1011 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 OTUD5Q96G74 571 aa15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-213ENST00000597325 SPTBN5Q9NRC6 3674 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-213ENST00000597325 GPR25O00155 361 aa15.11■□□□□ 0.01
SHKBP1-213ENST00000597325 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
SHKBP1-213ENST00000597325 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
SHKBP1-213ENST00000597325 NUP98P52948 1817 aa15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 ADM5C9JUS6 153 aa15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 AAMPQ13685 434 aa15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-213ENST00000597325 IBTKQ9P2D0 1353 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms