RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 CTSWP56202 376 aa17.96■□□□□ 0.47
C19orf54-206ENST00000596940 PAXIP1Q6ZW49 1069 aaPredicted RBP17.96■□□□□ 0.47
C19orf54-206ENST00000596940 XDHP47989 1333 aa17.96■□□□□ 0.46
C19orf54-206ENST00000596940 TRAF5O00463 557 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 ATP2B4P23634 1241 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 DOK7Q18PE1 504 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 CST9Q5W186 159 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
C19orf54-206ENST00000596940 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
C19orf54-206ENST00000596940 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 PRDM10Q9NQV6 1147 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 WBP1LQ9NX94 342 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 TLL2Q9Y6L7 1015 aa17.95■□□□□ 0.46
C19orf54-206ENST00000596940 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
C19orf54-206ENST00000596940 CELF2O95319 508 aaKnown RBP17.94■□□□□ 0.46
C19orf54-206ENST00000596940 HIRAP54198 1017 aaPredicted RBP17.94■□□□□ 0.46
C19orf54-206ENST00000596940 FLIIQ13045 1269 aa17.94■□□□□ 0.46
C19orf54-206ENST00000596940 BEGAINQ9BUH8 593 aa17.94■□□□□ 0.46
C19orf54-206ENST00000596940 ZBTB12Q9Y330 459 aaPredicted RBP17.94■□□□□ 0.46
C19orf54-206ENST00000596940 LTBP1Q14766 1721 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 FOXN1O15353 648 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 VIL1P09327 827 aaKnown RBP17.93■□□□□ 0.46
C19orf54-206ENST00000596940 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
C19orf54-206ENST00000596940 TTLL11Q8NHH1 800 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 TRPM4Q8TD43 1214 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 CAPNS2Q96L46 248 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 GLIS2Q9BZE0 524 aaPredicted RBP17.93■□□□□ 0.46
C19orf54-206ENST00000596940 BSDC1Q9NW68 430 aaPredicted RBP17.93■□□□□ 0.46
C19orf54-206ENST00000596940 LAMB2P55268 1798 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
C19orf54-206ENST00000596940 H7C1W4 665 aa17.92■□□□□ 0.46
C19orf54-206ENST00000596940 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
C19orf54-206ENST00000596940 PODNQ7Z5L7 613 aa17.92■□□□□ 0.46
C19orf54-206ENST00000596940 DCPSQ96C86 337 aaKnown RBP17.92■□□□□ 0.46
C19orf54-206ENST00000596940 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
C19orf54-206ENST00000596940 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
C19orf54-206ENST00000596940 DDX60Q8IY21 1712 aaKnown RBP17.92■□□□□ 0.46
C19orf54-206ENST00000596940 DUOX1Q9NRD9 1551 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 VAMP4O75379 141 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 MAP2K2P36507 400 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 IGHMBP2P38935 993 aaKnown RBP17.91■□□□□ 0.46
C19orf54-206ENST00000596940 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
C19orf54-206ENST00000596940 GCKRQ14397 625 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 G2E3Q7L622 706 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 SAPCD2Q86UD0 394 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 DNAAF4Q8WXU2 420 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 LRRC37AA6NMS7 1700 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
C19orf54-206ENST00000596940 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
C19orf54-206ENST00000596940 SAMD7Q7Z3H4 446 aa17.9■□□□□ 0.46
C19orf54-206ENST00000596940 PLA2G12BQ9BX93 195 aa17.9■□□□□ 0.46
C19orf54-206ENST00000596940 GREM2Q9H772 168 aa17.9■□□□□ 0.46
C19orf54-206ENST00000596940 KCNQ5Q9NR82 932 aa17.9■□□□□ 0.46
C19orf54-206ENST00000596940 GRM1Q13255 1194 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 RBM26Q5T8P6 1007 aaKnown RBP17.89■□□□□ 0.45
C19orf54-206ENST00000596940 CYP4F22Q6NT55 531 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 KRT26Q7Z3Y9 468 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 USP48Q86UV5 1035 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 ZNF408Q9H9D4 720 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.45
C19orf54-206ENST00000596940 SHTN1A0MZ66 631 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
C19orf54-206ENST00000596940 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 RSBN1LQ6PCB5 846 aaPredicted RBP17.88■□□□□ 0.45
C19orf54-206ENST00000596940 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 MPHOSPH8Q99549 860 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 ANKRD2Q9GZV1 360 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 LEMD3Q9Y2U8 911 aa17.88■□□□□ 0.45
C19orf54-206ENST00000596940 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
C19orf54-206ENST00000596940 SULF1Q8IWU6 871 aa17.87■□□□□ 0.45
C19orf54-206ENST00000596940 CA12O43570 354 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 ITGA6P23229 1130 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 MMP14P50281 582 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 LBX1P52954 281 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 C2orf69Q8N8R5 385 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 TAF1P21675 1872 aa17.86■□□□□ 0.45
C19orf54-206ENST00000596940 CAPN15O75808 1086 aa17.85■□□□□ 0.45
C19orf54-206ENST00000596940 CSF1RP07333 972 aa17.85■□□□□ 0.45
C19orf54-206ENST00000596940 ZNF280AP59817 542 aaPredicted RBP17.85■□□□□ 0.45
C19orf54-206ENST00000596940 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
C19orf54-206ENST00000596940 ZNF609O15014 1411 aa17.84■□□□□ 0.45
C19orf54-206ENST00000596940 HUNKP57058 714 aa17.84■□□□□ 0.45
C19orf54-206ENST00000596940 NOGQ13253 232 aa17.84■□□□□ 0.45
C19orf54-206ENST00000596940 OGFOD1Q8N543 542 aa17.84■□□□□ 0.45
C19orf54-206ENST00000596940 MYO3BQ8WXR4 1341 aa17.83■□□□□ 0.44
C19orf54-206ENST00000596940 ANKRD18BA2A2Z9 1011 aa17.83■□□□□ 0.44
C19orf54-206ENST00000596940 EGFRP00533 1210 aa17.83■□□□□ 0.44
C19orf54-206ENST00000596940 HSPA8P11142 646 aaKnown RBP17.83■□□□□ 0.44
C19orf54-206ENST00000596940 KCNJ4P48050 445 aa17.83■□□□□ 0.44
C19orf54-206ENST00000596940 CASP7P55210 303 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms