RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 HSPA4P34932 840 aa17.28■□□□□ 0.36
TRPM4-205ENST00000595519 ME3Q16798 604 aa17.28■□□□□ 0.36
TRPM4-205ENST00000595519 C11orf57Q6ZUT1 292 aaPredicted RBP17.28■□□□□ 0.36
TRPM4-205ENST00000595519 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.36
TRPM4-205ENST00000595519 PDCP20941 246 aa17.27■□□□□ 0.36
TRPM4-205ENST00000595519 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
TRPM4-205ENST00000595519 LRRC2Q9BYS8 371 aa17.27■□□□□ 0.36
TRPM4-205ENST00000595519 ZNF446Q9NWS9 450 aa17.27■□□□□ 0.36
TRPM4-205ENST00000595519 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
TRPM4-205ENST00000595519 NOM1Q5C9Z4 860 aaKnown RBP17.27■□□□□ 0.35
TRPM4-205ENST00000595519 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.35
TRPM4-205ENST00000595519 FLIIQ13045 1269 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
TRPM4-205ENST00000595519 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 PLEKHA4Q9H4M7 779 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 CEP57L1Q8IYX8 460 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 VPS18Q9P253 973 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
TRPM4-205ENST00000595519 EVCP57679 992 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 RUFY2Q8WXA3 655 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 GOLGA8FQ08AF8 430 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 GOLGA8DPQ0D2H9 430 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 SYCP1Q15431 976 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
TRPM4-205ENST00000595519 IFNKQ9P0W0 207 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 GNAI3P08754 354 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 SMC1AQ14683 1233 aaKnown RBP17.25■□□□□ 0.35
TRPM4-205ENST00000595519 LEO1Q8WVC0 666 aaPredicted RBP17.25■□□□□ 0.35
TRPM4-205ENST00000595519 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
TRPM4-205ENST00000595519 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
TRPM4-205ENST00000595519 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-205ENST00000595519 BLOC1S2Q6QNY1 142 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRPM4-205ENST00000595519 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 ORAI2Q96SN7 254 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRPM4-205ENST00000595519 PXDNQ92626 1479 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 PSME1Q06323 249 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 TMEM87AQ8NBN3 555 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
TRPM4-205ENST00000595519 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-205ENST00000595519 COL18A1P39060 1754 aa17.24■□□□□ 0.35
TRPM4-205ENST00000595519 IFIT2P09913 472 aaKnown RBP17.23■□□□□ 0.35
TRPM4-205ENST00000595519 PTH1RQ03431 593 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 RABEP2Q9H5N1 569 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 SERPINC1P01008 464 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 GNG11P61952 73 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
TRPM4-205ENST00000595519 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
TRPM4-205ENST00000595519 NEMFO60524 1076 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 JAK2O60674 1132 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 ARFGAP3Q9NP61 516 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
TRPM4-205ENST00000595519 PLA2G4AP47712 749 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
TRPM4-205ENST00000595519 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
TRPM4-205ENST00000595519 SRRTQ9BXP5 876 aaKnown RBP17.22■□□□□ 0.35
TRPM4-205ENST00000595519 STX1AQ16623 288 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 PLA2G4DQ86XP0 818 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
TRPM4-205ENST00000595519 SGSM2O43147 1006 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 GCP02774 474 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 TPCN1Q9ULQ1 816 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 KIF2AO00139 706 aaPredicted RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 HSP90B2PQ58FF3 399 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 BRF1Q92994 677 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.35
TRPM4-205ENST00000595519 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
TRPM4-205ENST00000595519 HOXB7P09629 217 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 CASQ1P31415 396 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
TRPM4-205ENST00000595519 ANO10Q9NW15 660 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 FHOD1Q9Y613 1164 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
TRPM4-205ENST00000595519 TTC31Q49AM3 519 aaPredicted RBP17.2■□□□□ 0.34
TRPM4-205ENST00000595519 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
TRPM4-205ENST00000595519 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
TRPM4-205ENST00000595519 PUF60Q9UHX1 559 aaKnown RBP17.19■□□□□ 0.34
TRPM4-205ENST00000595519 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
TRPM4-205ENST00000595519 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms