RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FMNL2Q96PY5 1086 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 HAUS7Q99871 368 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 CYP27B1O15528 508 aa19.48■□□□□ 0.71
LIG1-206ENST00000594067 ZSCAN20P17040 1043 aaPredicted RBP19.48■□□□□ 0.71
LIG1-206ENST00000594067 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 H3BQV1 296 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 NR1I2O75469 434 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 RESTQ13127 1097 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 CBX8Q9HC52 389 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 DDX19AQ9NUU7 478 aaKnown RBP19.47■□□□□ 0.71
LIG1-206ENST00000594067 FOSBP53539 338 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 FGD1P98174 961 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 STOX1Q6ZVD7 989 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 CLSTN2Q9H4D0 955 aa19.47■□□□□ 0.71
LIG1-206ENST00000594067 RIOK3O14730 519 aaKnown RBP19.46■□□□□ 0.71
LIG1-206ENST00000594067 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 PPP4R3BQ5MIZ7 849 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 SCN11AQ9UI33 1791 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 CASP7P55210 303 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 SCRN1Q12765 414 aa19.46■□□□□ 0.71
LIG1-206ENST00000594067 GOLGA6L6A8MZA4 724 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 ATP2B3Q16720 1220 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 CABP4P57796 275 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 CBX1P83916 185 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 CEBPZQ03701 1054 aaKnown RBP19.45■□□□□ 0.7
LIG1-206ENST00000594067 DMTNQ08495 405 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 KBTBD3Q8NAB2 608 aa19.45■□□□□ 0.7
LIG1-206ENST00000594067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.45■□□□□ 0.76e-6■□□□□ 8.9
LIG1-206ENST00000594067 RFX7Q2KHR2 1363 aa19.44■□□□□ 0.7
LIG1-206ENST00000594067 GOLIM4O00461 696 aa19.44■□□□□ 0.7
LIG1-206ENST00000594067 ZNF142P52746 1687 aaPredicted RBP19.44■□□□□ 0.7
LIG1-206ENST00000594067 PTGS1P23219 599 aa19.44■□□□□ 0.7
LIG1-206ENST00000594067 UTP14CQ5TAP6 766 aaKnown RBP19.44■□□□□ 0.7
LIG1-206ENST00000594067 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
LIG1-206ENST00000594067 TIMM10P62072 90 aa19.43■□□□□ 0.7
LIG1-206ENST00000594067 CHAF1AQ13111 956 aaPredicted RBP19.43■□□□□ 0.7
LIG1-206ENST00000594067 RBM43Q6ZSC3 357 aaKnown RBP19.43■□□□□ 0.7
LIG1-206ENST00000594067 CTIFO43310 598 aaKnown RBP19.42■□□□□ 0.7
LIG1-206ENST00000594067 FOXO4P98177 505 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 APOBRQ0VD83 1088 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 C19orf44Q9H6X5 657 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 PPFIA3O75145 1194 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 ANKRD7Q92527 254 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 DNAJC25Q9H1X3 360 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 PAG1Q9NWQ8 432 aa19.42■□□□□ 0.7
LIG1-206ENST00000594067 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 PDCL2Q8N4E4 241 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 SMARCC2Q8TAQ2 1214 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 ZSCAN16Q9H4T2 348 aaPredicted RBP19.41■□□□□ 0.7
LIG1-206ENST00000594067 PFKFB2O60825 505 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 CCT2P78371 535 aaKnown RBP19.41■□□□□ 0.7
LIG1-206ENST00000594067 DHX32Q7L7V1 743 aaKnown RBP19.41■□□□□ 0.7
LIG1-206ENST00000594067 CCDC186Q7Z3E2 898 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 DRC7Q8IY82 874 aa19.41■□□□□ 0.7
LIG1-206ENST00000594067 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
LIG1-206ENST00000594067 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
LIG1-206ENST00000594067 TTLL7Q6ZT98 887 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 NSUN7Q8NE18 718 aaKnown RBP19.4■□□□□ 0.7
LIG1-206ENST00000594067 TRIM5Q9C035 493 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
LIG1-206ENST00000594067 NAP1L2Q9ULW6 460 aaPredicted RBP19.4■□□□□ 0.7
LIG1-206ENST00000594067 H7C1W4 665 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 CTDNEP1O95476 244 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 ZNF165P49910 485 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 CFAP45Q9UL16 551 aa19.4■□□□□ 0.7
LIG1-206ENST00000594067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.39■□□□□ 0.7
LIG1-206ENST00000594067 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.7
LIG1-206ENST00000594067 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
LIG1-206ENST00000594067 HELLSQ9NRZ9 838 aa19.39■□□□□ 0.69
LIG1-206ENST00000594067 ZHX1Q9UKY1 873 aaPredicted RBP19.39■□□□□ 0.69
LIG1-206ENST00000594067 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 ZNF75DP51815 510 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 LRMPQ12912 555 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 LRRC24Q50LG9 513 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 TDRD7Q8NHU6 1098 aaKnown RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 LLPHQ9BRT6 129 aaKnown RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 NCOA5Q9HCD5 579 aaKnown RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 ADD1P35611 737 aaKnown RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 MST1RQ04912 1400 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 ZMYM1Q5SVZ6 1142 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 DSCC1Q9BVC3 393 aa19.38■□□□□ 0.69
LIG1-206ENST00000594067 CWC25Q9NXE8 425 aaPredicted RBP19.38■□□□□ 0.69
LIG1-206ENST00000594067 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms