RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SERPINB2P05120 415 aa25.42■■□□□ 1.66
PNKP-203ENST00000593946 METTL24Q5JXM2 366 aa25.42■■□□□ 1.66
PNKP-203ENST00000593946 DBNDD2Q9BQY9 259 aa25.42■■□□□ 1.66
PNKP-203ENST00000593946 AKAP2Q9Y2D5 859 aa25.42■■□□□ 1.66
PNKP-203ENST00000593946 MROH5Q6ZUA9 1318 aa25.41■■□□□ 1.66
PNKP-203ENST00000593946 A0A1B0GUL7 405 aa25.41■■□□□ 1.66
PNKP-203ENST00000593946 MPHOSPH8Q99549 860 aa25.41■■□□□ 1.66
PNKP-203ENST00000593946 STK32BQ9NY57 414 aa25.41■■□□□ 1.66
PNKP-203ENST00000593946 TRIM6-TRIM34B2RNG4 842 aa25.4■■□□□ 1.66
PNKP-203ENST00000593946 IGHMBP2P38935 993 aaKnown RBP25.4■■□□□ 1.66
PNKP-203ENST00000593946 TIMM10P62072 90 aa25.4■■□□□ 1.66
PNKP-203ENST00000593946 ANKRD31Q8N7Z5 1873 aa25.39■■□□□ 1.66
PNKP-203ENST00000593946 CCDC125Q86Z20 511 aa25.39■■□□□ 1.65
PNKP-203ENST00000593946 NEUROD6Q96NK8 337 aa25.39■■□□□ 1.65
PNKP-203ENST00000593946 ATP5JP18859 108 aa25.38■■□□□ 1.65
PNKP-203ENST00000593946 RILPL2Q969X0 211 aa25.38■■□□□ 1.65
PNKP-203ENST00000593946 PDE8BO95263 885 aa25.37■■□□□ 1.65
PNKP-203ENST00000593946 ST5P78524 1137 aa25.37■■□□□ 1.65
PNKP-203ENST00000593946 ANKRD18AQ8IVF6 992 aa25.37■■□□□ 1.65
PNKP-203ENST00000593946 CNTROBQ8N137 903 aa25.37■■□□□ 1.65
PNKP-203ENST00000593946 MAP4K4O95819 1239 aaPredicted RBP25.36■■□□□ 1.65
PNKP-203ENST00000593946 ATP2B3Q16720 1220 aa25.36■■□□□ 1.65
PNKP-203ENST00000593946 CASC1Q6TDU7 716 aa25.35■■□□□ 1.65
PNKP-203ENST00000593946 CELF1Q92879 486 aaKnown RBP25.35■■□□□ 1.65
PNKP-203ENST00000593946 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
PNKP-203ENST00000593946 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
PNKP-203ENST00000593946 MFAP1P55081 439 aaKnown RBP25.34■■□□□ 1.65
PNKP-203ENST00000593946 PUM3Q15397 648 aaKnown RBP25.34■■□□□ 1.65
PNKP-203ENST00000593946 CRY2Q49AN0 593 aa25.34■■□□□ 1.65
PNKP-203ENST00000593946 XAGE2Q96GT9 111 aa25.34■■□□□ 1.65
PNKP-203ENST00000593946 BOLA2Q9H3K6 86 aa25.34■■□□□ 1.65
PNKP-203ENST00000593946 FGFR2P21802 821 aa25.33■■□□□ 1.65
PNKP-203ENST00000593946 DDX46Q7L014 1031 aaKnown RBP25.33■■□□□ 1.65
PNKP-203ENST00000593946 CHMLP26374 656 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 ADORA1P30542 326 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 RPS8P62241 208 aaKnown RBP25.32■■□□□ 1.64
PNKP-203ENST00000593946 CHRNDQ07001 517 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 HELBQ8NG08 1087 aaPredicted RBP25.32■■□□□ 1.64
PNKP-203ENST00000593946 EVI5LQ96CN4 794 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 AKAP11Q9UKA4 1901 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 EIF5BO60841 1220 aaKnown RBP25.32■■□□□ 1.64
PNKP-203ENST00000593946 MMP10P09238 476 aa25.32■■□□□ 1.64
PNKP-203ENST00000593946 KLRG2A4D1S0 409 aaPredicted RBP25.31■■□□□ 1.64
PNKP-203ENST00000593946 LPIN2Q92539 896 aa25.31■■□□□ 1.64
PNKP-203ENST00000593946 HAUS7Q99871 368 aa25.31■■□□□ 1.64
PNKP-203ENST00000593946 MSL1Q68DK7 614 aa25.3■■□□□ 1.64
PNKP-203ENST00000593946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.3■■□□□ 1.64
PNKP-203ENST00000593946 TAF5LO75529 589 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 TBC1D32Q96NH3 1257 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 CCDC158Q5M9N0 1113 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 GORABQ5T7V8 394 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
PNKP-203ENST00000593946 GRAPQ13588 217 aa25.28■■□□□ 1.64
PNKP-203ENST00000593946 GRAPLQ8TC17 118 aaPredicted RBP25.28■■□□□ 1.64
PNKP-203ENST00000593946 SLC5A1P13866 664 aa25.27■■□□□ 1.64
PNKP-203ENST00000593946 RPGRQ92834 1020 aaKnown RBP25.27■■□□□ 1.64
PNKP-203ENST00000593946 BRIP1Q9BX63 1249 aa25.27■■□□□ 1.64
PNKP-203ENST00000593946 COL11A2P13942 1736 aaPredicted RBP25.27■■□□□ 1.64
PNKP-203ENST00000593946 TTC39AQ5SRH9 613 aa25.26■■□□□ 1.63
PNKP-203ENST00000593946 ESYT1Q9BSJ8 1104 aa25.26■■□□□ 1.63
PNKP-203ENST00000593946 IFIT1P09914 478 aaKnown RBP25.26■■□□□ 1.63
PNKP-203ENST00000593946 ZNF512BQ96KM6 892 aaPredicted RBP25.26■■□□□ 1.63
PNKP-203ENST00000593946 SNAP23O00161 211 aa25.25■■□□□ 1.63
PNKP-203ENST00000593946 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
PNKP-203ENST00000593946 ANP32AP39687 249 aaKnown RBP25.25■■□□□ 1.63
PNKP-203ENST00000593946 EDC3Q96F86 508 aaKnown RBP25.25■■□□□ 1.63
PNKP-203ENST00000593946 DNAJC2Q99543 621 aaKnown RBP25.25■■□□□ 1.63
PNKP-203ENST00000593946 C22orf23Q9BZE7 217 aa25.25■■□□□ 1.63
PNKP-203ENST00000593946 NDUFB9Q9Y6M9 179 aa25.25■■□□□ 1.63
PNKP-203ENST00000593946 MYH7P12883 1935 aa25.24■■□□□ 1.63
PNKP-203ENST00000593946 RBM17Q96I25 401 aaKnown RBP25.24■■□□□ 1.63
PNKP-203ENST00000593946 RFX7Q2KHR2 1363 aa25.24■■□□□ 1.63
PNKP-203ENST00000593946 UBE4AQ14139 1066 aa25.23■■□□□ 1.63
PNKP-203ENST00000593946 LRRC37AA6NMS7 1700 aa25.23■■□□□ 1.63
PNKP-203ENST00000593946 REC8O95072 547 aa25.23■■□□□ 1.63
PNKP-203ENST00000593946 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
PNKP-203ENST00000593946 PDGFDQ9GZP0 370 aaPredicted RBP25.23■■□□□ 1.63
PNKP-203ENST00000593946 PAG1Q9NWQ8 432 aa25.23■■□□□ 1.63
PNKP-203ENST00000593946 HIP1O00291 1037 aa25.22■■□□□ 1.63
PNKP-203ENST00000593946 ARID4AP29374 1257 aaPredicted RBP25.22■■□□□ 1.63
PNKP-203ENST00000593946 CCDC102BQ68D86 513 aa25.22■■□□□ 1.63
PNKP-203ENST00000593946 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
PNKP-203ENST00000593946 ANKRD2Q9GZV1 360 aa25.22■■□□□ 1.63
PNKP-203ENST00000593946 PHKA1P46020 1223 aa25.21■■□□□ 1.63
PNKP-203ENST00000593946 RBM25P49756 843 aaKnown RBP25.21■■□□□ 1.63
PNKP-203ENST00000593946 SCARF1Q14162 830 aa25.21■■□□□ 1.63
PNKP-203ENST00000593946 DIAPH3Q9NSV4 1193 aa25.21■■□□□ 1.63
PNKP-203ENST00000593946 MYO5AQ9Y4I1 1855 aaKnown RBP25.21■■□□□ 1.63
PNKP-203ENST00000593946 KBTBD3Q8NAB2 608 aa25.2■■□□□ 1.63
PNKP-203ENST00000593946 IL25Q9H293 177 aa25.2■■□□□ 1.63
PNKP-203ENST00000593946 GOLIM4O00461 696 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 SGSM2O43147 1006 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 UQCRFS1P1P0C7P4 283 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 PDE6BP35913 854 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 MCAMP43121 646 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 TICAM2Q86XR7 235 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 SLC16A10Q8TF71 515 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 USP26Q9BXU7 913 aa25.2■■□□□ 1.62
PNKP-203ENST00000593946 SRGNP10124 158 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms