RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CALCOCO1Q9P1Z2 691 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 CRB1P82279 1406 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 GYS2P54840 703 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 TOB2Q14106 344 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-242ENST00000593093 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 CPS1P31327 1500 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
CIRBP-242ENST00000593093 GOLPH3LQ9H4A5 285 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 AATKQ6ZMQ8 1374 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 TPM4P67936 248 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 ARGLU1Q9NWB6 273 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-242ENST00000593093 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 CFAP100Q494V2 611 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 TM6SF1Q9BZW5 370 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 TTC41PQ6P2S7 1318 aa16.62■□□□□ 0.25
CIRBP-242ENST00000593093 HNRNPH2P55795 449 aaKnown RBP16.61■□□□□ 0.25
CIRBP-242ENST00000593093 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
CIRBP-242ENST00000593093 CARD6Q9BX69 1037 aa16.61■□□□□ 0.25
CIRBP-242ENST00000593093 CLCN6P51797 869 aa16.61■□□□□ 0.25
CIRBP-242ENST00000593093 POLA2Q14181 598 aa16.61■□□□□ 0.25
CIRBP-242ENST00000593093 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
CIRBP-242ENST00000593093 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
CIRBP-242ENST00000593093 IQCB1Q15051 598 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-242ENST00000593093 UTP14AQ9BVJ6 771 aaKnown RBP16.6■□□□□ 0.25
CIRBP-242ENST00000593093 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 NEMFO60524 1076 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-242ENST00000593093 HAND2P61296 217 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 ELP1O95163 1332 aa16.6■□□□□ 0.25
CIRBP-242ENST00000593093 HIP1O00291 1037 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 GJB4Q9NTQ9 266 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 ATP7BP35670 1465 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 CCZ1BP86790 482 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 CCZ1P86791 482 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-242ENST00000593093 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-242ENST00000593093 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
CIRBP-242ENST00000593093 SCRN1Q12765 414 aa16.58■□□□□ 0.25
CIRBP-242ENST00000593093 RESTQ13127 1097 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 ESCO1Q5FWF5 840 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 C10orf67Q8IYJ2 551 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 PPP1R13BQ96KQ4 1090 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 TTC21AQ8NDW8 1320 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-242ENST00000593093 MRFAP1L1Q96HT8 127 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 ZNF446Q9NWS9 450 aa16.58■□□□□ 0.24
CIRBP-242ENST00000593093 CPLX1O14810 134 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 SASH1O94885 1247 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 SLC3A2P08195 630 aaKnown RBP16.57■□□□□ 0.24
CIRBP-242ENST00000593093 LMAN1P49257 510 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
CIRBP-242ENST00000593093 ATP2B1P20020 1258 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 GNG11P61952 73 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
CIRBP-242ENST00000593093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.246e-7■□□□□ 11
CIRBP-242ENST00000593093 GSDMDP57764 484 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 CTAGE5O15320 804 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 E4F1Q66K89 784 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 PNMA6AP0CW24 399 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 NDUFA8P51970 172 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 SYCP1Q15431 976 aa16.56■□□□□ 0.24
CIRBP-242ENST00000593093 DHX40Q8IX18 779 aaKnown RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-242ENST00000593093 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
CIRBP-242ENST00000593093 EVCP57679 992 aa16.55■□□□□ 0.24
CIRBP-242ENST00000593093 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
CIRBP-242ENST00000593093 GOLIM4O00461 696 aa16.55■□□□□ 0.24
CIRBP-242ENST00000593093 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
CIRBP-242ENST00000593093 ATP5J2-PTCD1G3V325 749 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
CIRBP-242ENST00000593093 TAF5LO75529 589 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 CYP21A2P08686 494 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 MCM6Q14566 821 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
CIRBP-242ENST00000593093 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 NYAP1Q6ZVC0 841 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 TOMM22Q9NS69 142 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-242ENST00000593093 UBASH3AP57075 661 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
CIRBP-242ENST00000593093 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 KRT32Q14532 448 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-242ENST00000593093 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 GRM8O00222 908 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 ST5P78524 1137 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 MYD88Q99836 296 aa16.54■□□□□ 0.24
CIRBP-242ENST00000593093 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms