RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
ZNF540-210ENST00000592533 FAM13BQ9NYF5 915 aa13.72□□□□□ -0.21
ZNF540-210ENST00000592533 CYP27B1O15528 508 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.21
ZNF540-210ENST00000592533 Q6ZUG5 572 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 H7C1W4 665 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 FOXO4P98177 505 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 BRF1Q92994 677 aa13.71□□□□□ -0.21
ZNF540-210ENST00000592533 CPDO75976 1380 aa13.71□□□□□ -0.22
ZNF540-210ENST00000592533 JAK2O60674 1132 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 CBX8Q9HC52 389 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 KCPQ6ZWJ8 1503 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
ZNF540-210ENST00000592533 ATL3Q6DD88 541 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 FBXL16Q8N461 479 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 SALL1Q9NSC2 1324 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 TNS3Q68CZ2 1445 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 A0A087WZG4 1122 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
ZNF540-210ENST00000592533 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
ZNF540-210ENST00000592533 EXOSC10Q01780 885 aaKnown RBP13.69□□□□□ -0.22
ZNF540-210ENST00000592533 SCRN1Q12765 414 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 STK3Q13188 491 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
ZNF540-210ENST00000592533 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
ZNF540-210ENST00000592533 PYCARDQ9ULZ3 195 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 CDC25BP30305 580 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
ZNF540-210ENST00000592533 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
ZNF540-210ENST00000592533 TFIP11Q9UBB9 837 aaKnown RBP13.69□□□□□ -0.22
ZNF540-210ENST00000592533 NR1I2O75469 434 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 CAMK4Q16566 473 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 ZMYM1Q5SVZ6 1142 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
ZNF540-210ENST00000592533 MPNDQ8N594 471 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.68□□□□□ -0.22
ZNF540-210ENST00000592533 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
ZNF540-210ENST00000592533 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
ZNF540-210ENST00000592533 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
ZNF540-210ENST00000592533 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
ZNF540-210ENST00000592533 CIAO1O76071 339 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 ZNF75DP51815 510 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
ZNF540-210ENST00000592533 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 CTAGE5O15320 804 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 CTDNEP1O95476 244 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 IL15P40933 162 aaPredicted RBP13.67□□□□□ -0.22
ZNF540-210ENST00000592533 EVCP57679 992 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 SARM1Q6SZW1 724 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
ZNF540-210ENST00000592533 H3BQV1 296 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 IFFO2Q5TF58 517 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 NDUFB9Q9Y6M9 179 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
ZNF540-210ENST00000592533 CHGBP05060 677 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
ZNF540-210ENST00000592533 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
ZNF540-210ENST00000592533 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
ZNF540-210ENST00000592533 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 NBPF14Q5TI25 921 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
ZNF540-210ENST00000592533 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
ZNF540-210ENST00000592533 C4AP0C0L4 1744 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 C4BP0C0L5 1744 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 CABP4P57796 275 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 SPC24Q8NBT2 197 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
ZNF540-210ENST00000592533 PTGS1P23219 599 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 ZNF165P49910 485 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 IQCB1Q15051 598 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
ZNF540-210ENST00000592533 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
ZNF540-210ENST00000592533 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
ZNF540-210ENST00000592533 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
ZNF540-210ENST00000592533 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
ZNF540-210ENST00000592533 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms