RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TRAF5O00463 557 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 RIMBP2O15034 1052 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 ECE2O60344 883 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 ANKRD18AQ8IVF6 992 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
CCDC43-205ENST00000592333 CDC5LQ99459 802 aaKnown RBP24.21■■□□□ 1.47
CCDC43-205ENST00000592333 ANKIB1Q9P2G1 1089 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 GGA1Q9UJY5 639 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 THSD7BQ9C0I4 1608 aa24.21■■□□□ 1.47
CCDC43-205ENST00000592333 ZNF609O15014 1411 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 MAP2K2P36507 400 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 SAPCD2Q86UD0 394 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 WDR63Q8IWG1 891 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 CAPNS2Q96L46 248 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 COL4A1P02462 1669 aa24.2■■□□□ 1.46
CCDC43-205ENST00000592333 RTL9Q8NET4 1388 aa24.19■■□□□ 1.46
CCDC43-205ENST00000592333 XDHP47989 1333 aa24.19■■□□□ 1.46
CCDC43-205ENST00000592333 ANP32CO43423 234 aa24.19■■□□□ 1.46
CCDC43-205ENST00000592333 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
CCDC43-205ENST00000592333 VIL1P09327 827 aaKnown RBP24.19■■□□□ 1.46
CCDC43-205ENST00000592333 UFL1O94874 794 aa24.18■■□□□ 1.46
CCDC43-205ENST00000592333 CELF2O95319 508 aaKnown RBP24.18■■□□□ 1.46
CCDC43-205ENST00000592333 SLC4A2P04920 1241 aa24.18■■□□□ 1.46
CCDC43-205ENST00000592333 CTSWP56202 376 aa24.18■■□□□ 1.46
CCDC43-205ENST00000592333 FMR1Q06787 632 aaKnown RBP eCLIP24.18■■□□□ 1.46
CCDC43-205ENST00000592333 TRPM4Q8TD43 1214 aa24.18■■□□□ 1.46
CCDC43-205ENST00000592333 GLIS2Q9BZE0 524 aaPredicted RBP24.18■■□□□ 1.46
CCDC43-205ENST00000592333 MRS2Q9HD23 443 aa24.18■■□□□ 1.46
CCDC43-205ENST00000592333 ZBTB12Q9Y330 459 aaPredicted RBP24.18■■□□□ 1.46
CCDC43-205ENST00000592333 G3V3G9 751 aa24.17■■□□□ 1.46
CCDC43-205ENST00000592333 ATP2B4P23634 1241 aa24.17■■□□□ 1.46
CCDC43-205ENST00000592333 DCAF8Q5TAQ9 597 aa24.17■■□□□ 1.46
CCDC43-205ENST00000592333 TTLL11Q8NHH1 800 aa24.17■■□□□ 1.46
CCDC43-205ENST00000592333 GPR101Q96P66 508 aaPredicted RBP24.17■■□□□ 1.46
CCDC43-205ENST00000592333 BSDC1Q9NW68 430 aaPredicted RBP24.17■■□□□ 1.46
CCDC43-205ENST00000592333 NEURL1BA8MQ27 555 aa24.16■■□□□ 1.46
CCDC43-205ENST00000592333 DOK7Q18PE1 504 aa24.16■■□□□ 1.46
CCDC43-205ENST00000592333 AGBL3Q8NEM8 1001 aa24.16■■□□□ 1.46
CCDC43-205ENST00000592333 CACNA1FO60840 1977 aa24.15■■□□□ 1.46
CCDC43-205ENST00000592333 H7C1W4 665 aa24.15■■□□□ 1.46
CCDC43-205ENST00000592333 PODNQ7Z5L7 613 aa24.15■■□□□ 1.46
CCDC43-205ENST00000592333 BEGAINQ9BUH8 593 aa24.15■■□□□ 1.46
CCDC43-205ENST00000592333 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.45
CCDC43-205ENST00000592333 SAMD7Q7Z3H4 446 aa24.14■■□□□ 1.45
CCDC43-205ENST00000592333 PLA2G12BQ9BX93 195 aa24.14■■□□□ 1.45
CCDC43-205ENST00000592333 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
CCDC43-205ENST00000592333 FLIIQ13045 1269 aa24.13■■□□□ 1.45
CCDC43-205ENST00000592333 CYP4F22Q6NT55 531 aa24.13■■□□□ 1.45
CCDC43-205ENST00000592333 PAXIP1Q6ZW49 1069 aaPredicted RBP24.13■■□□□ 1.45
CCDC43-205ENST00000592333 DCPSQ96C86 337 aaKnown RBP24.13■■□□□ 1.45
CCDC43-205ENST00000592333 KCNQ5Q9NR82 932 aa24.13■■□□□ 1.45
CCDC43-205ENST00000592333 FANCIQ9NVI1 1328 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 MYH3P11055 1940 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 CA12O43570 354 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 HSPA8P11142 646 aaKnown RBP24.12■■□□□ 1.45
CCDC43-205ENST00000592333 LBX1P52954 281 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 GCKRQ14397 625 aa24.12■■□□□ 1.45
CCDC43-205ENST00000592333 JARID2Q92833 1246 aaPredicted RBP24.12■■□□□ 1.45
CCDC43-205ENST00000592333 VAMP4O75379 141 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 MMP14P50281 582 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 ZNF280AP59817 542 aaPredicted RBP24.11■■□□□ 1.45
CCDC43-205ENST00000592333 CWF19L2Q2TBE0 894 aaKnown RBP24.11■■□□□ 1.45
CCDC43-205ENST00000592333 TBC1D10BQ4KMP7 808 aaPredicted RBP24.11■■□□□ 1.45
CCDC43-205ENST00000592333 RSBN1LQ6PCB5 846 aaPredicted RBP24.11■■□□□ 1.45
CCDC43-205ENST00000592333 G2E3Q7L622 706 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 USP48Q86UV5 1035 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 LINS1Q8NG48 757 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 CCDC85AQ96PX6 553 aaPredicted RBP24.11■■□□□ 1.45
CCDC43-205ENST00000592333 MED23Q9ULK4 1368 aa24.11■■□□□ 1.45
CCDC43-205ENST00000592333 KIF4BQ2VIQ3 1234 aa24.1■■□□□ 1.45
CCDC43-205ENST00000592333 KRT26Q7Z3Y9 468 aa24.1■■□□□ 1.45
CCDC43-205ENST00000592333 DNAAF4Q8WXU2 420 aa24.1■■□□□ 1.45
CCDC43-205ENST00000592333 GREM2Q9H772 168 aa24.1■■□□□ 1.45
CCDC43-205ENST00000592333 MINPP1Q9UNW1 487 aa24.1■■□□□ 1.45
CCDC43-205ENST00000592333 SCN9AQ15858 1988 aa24.09■■□□□ 1.45
CCDC43-205ENST00000592333 FKBP5Q13451 457 aaPredicted RBP24.09■■□□□ 1.45
CCDC43-205ENST00000592333 UBE3BQ7Z3V4 1068 aa24.09■■□□□ 1.45
CCDC43-205ENST00000592333 LEMD3Q9Y2U8 911 aa24.09■■□□□ 1.45
CCDC43-205ENST00000592333 PSME4Q14997 1843 aa24.09■■□□□ 1.45
CCDC43-205ENST00000592333 USP17L3A6NCW0 530 aa24.08■■□□□ 1.45
CCDC43-205ENST00000592333 USP17L4A6NCW7 530 aa24.08■■□□□ 1.45
CCDC43-205ENST00000592333 CSF1RP07333 972 aa24.08■■□□□ 1.45
CCDC43-205ENST00000592333 IGHMBP2P38935 993 aaKnown RBP24.08■■□□□ 1.45
CCDC43-205ENST00000592333 BRPF1P55201 1214 aaPredicted RBP24.08■■□□□ 1.45
CCDC43-205ENST00000592333 USP17L1Q7RTZ2 530 aa24.08■■□□□ 1.45
CCDC43-205ENST00000592333 GMLQ99445 158 aa24.08■■□□□ 1.45
CCDC43-205ENST00000592333 EGFRP00533 1210 aa24.07■■□□□ 1.44
CCDC43-205ENST00000592333 CCT4P50991 539 aaKnown RBP24.07■■□□□ 1.44
CCDC43-205ENST00000592333 NOGQ13253 232 aa24.07■■□□□ 1.44
CCDC43-205ENST00000592333 ANKRD2Q9GZV1 360 aa24.07■■□□□ 1.44
CCDC43-205ENST00000592333 ZNF408Q9H9D4 720 aa24.07■■□□□ 1.44
CCDC43-205ENST00000592333 USP17L8P0C7I0 530 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 CASP7P55210 303 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 SULF1Q8IWU6 871 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 C2orf69Q8N8R5 385 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 COA1Q9GZY4 146 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 MYO3BQ8WXR4 1341 aa24.06■■□□□ 1.44
CCDC43-205ENST00000592333 CAPN15O75808 1086 aa24.05■■□□□ 1.44
CCDC43-205ENST00000592333 HUNKP57058 714 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms