RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TTLL11Q8NHH1 800 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 NSFL1CQ9UNZ2 370 aaKnown RBP23.54■■□□□ 1.36
MBD3-209ENST00000592012 ERVV-1B6SEH8 477 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 GJB2P29033 226 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 DDB1Q16531 1140 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 SLFNL1Q499Z3 407 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 TCEANC2Q96MN5 208 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 NUP98P52948 1817 aa23.53■■□□□ 1.36
MBD3-209ENST00000592012 TAF7LQ5H9L4 462 aa23.53■■□□□ 1.36
MBD3-209ENST00000592012 NECAB1Q8N987 351 aa23.53■■□□□ 1.36
MBD3-209ENST00000592012 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
MBD3-209ENST00000592012 TOB2Q14106 344 aaPredicted RBP23.52■■□□□ 1.36
MBD3-209ENST00000592012 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
MBD3-209ENST00000592012 ZMYM1Q5SVZ6 1142 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
MBD3-209ENST00000592012 XAGE2Q96GT9 111 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 CYP21A2P08686 494 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 ADORA1P30542 326 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 DZIP3Q86Y13 1208 aaKnown RBP23.52■■□□□ 1.36
MBD3-209ENST00000592012 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
MBD3-209ENST00000592012 MBD3O95983 291 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 CCDC158Q5M9N0 1113 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 GREM2Q9H772 168 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 RIPOR2Q9Y4F9 1068 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 SPEF2Q9C093 1822 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 ITGA6P23229 1130 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 NEK1Q96PY6 1258 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 RTN4Q9NQC3 1192 aaKnown RBP23.51■■□□□ 1.35
MBD3-209ENST00000592012 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
MBD3-209ENST00000592012 TRMT112Q9UI30 125 aaKnown RBP23.51■■□□□ 1.35
MBD3-209ENST00000592012 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
MBD3-209ENST00000592012 IRS4O14654 1257 aaPredicted RBP23.5■■□□□ 1.35
MBD3-209ENST00000592012 CTSWP56202 376 aa23.5■■□□□ 1.35
MBD3-209ENST00000592012 TMEM63CQ9P1W3 806 aa23.5■■□□□ 1.35
MBD3-209ENST00000592012 RNF113AO15541 343 aaKnown RBP23.5■■□□□ 1.35
MBD3-209ENST00000592012 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 DTNBO60941 627 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 GORABQ5T7V8 394 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 ZNF34Q8IZ26 560 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 MARCH10Q8NA82 808 aaPredicted RBP23.49■■□□□ 1.35
MBD3-209ENST00000592012 DSCC1Q9BVC3 393 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 GDPD2Q9HCC8 539 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 F13A1P00488 732 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
MBD3-209ENST00000592012 FKBP4Q02790 459 aaKnown RBP eCLIP23.49■■□□□ 1.352e-6■■□□□ 13.2
MBD3-209ENST00000592012 LDHAL6AQ6ZMR3 332 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 USP48Q86UV5 1035 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 MYH3P11055 1940 aa23.49■■□□□ 1.35
MBD3-209ENST00000592012 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
MBD3-209ENST00000592012 INTS5Q6P9B9 1019 aaKnown RBP23.48■■□□□ 1.35
MBD3-209ENST00000592012 MTMR6Q9Y217 621 aa23.48■■□□□ 1.35
MBD3-209ENST00000592012 UBN2Q6ZU65 1347 aa23.48■■□□□ 1.35
MBD3-209ENST00000592012 SPATA31A5Q5VU36 1347 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 SPATA31A7Q8IWB4 1347 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 ANKRD18BA2A2Z9 1011 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 TMEM87AQ8NBN3 555 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 ACSBG1Q96GR2 724 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 RIC1Q4ADV7 1423 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 PDE8AO60658 829 aa23.47■■□□□ 1.35
MBD3-209ENST00000592012 MAST3O60307 1309 aa23.46■■□□□ 1.35
MBD3-209ENST00000592012 HSPD1P10809 573 aaKnown RBP23.46■■□□□ 1.35
MBD3-209ENST00000592012 METTL24Q5JXM2 366 aa23.46■■□□□ 1.35
MBD3-209ENST00000592012 GADD45BO75293 160 aaPredicted RBP23.45■■□□□ 1.35
MBD3-209ENST00000592012 SCARF1Q14162 830 aa23.45■■□□□ 1.35
MBD3-209ENST00000592012 ATP6V1DQ9Y5K8 247 aa23.45■■□□□ 1.35
MBD3-209ENST00000592012 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
MBD3-209ENST00000592012 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
MBD3-209ENST00000592012 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
MBD3-209ENST00000592012 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
MBD3-209ENST00000592012 STOX1Q6ZVD7 989 aa23.45■■□□□ 1.34
MBD3-209ENST00000592012 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
MBD3-209ENST00000592012 CCDC87Q9NVE4 849 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 CNPY2Q9Y2B0 182 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 LOC102724428A0A0B4J2F2 783 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 A0A0G2JS52 829 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 SIK1P57059 783 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 VGLL2Q8N8G2 317 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 OSBP2Q969R2 916 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 CNNM1Q9NRU3 951 aa23.44■■□□□ 1.34
MBD3-209ENST00000592012 CRKLP46109 303 aaKnown RBP23.43■■□□□ 1.34
MBD3-209ENST00000592012 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
MBD3-209ENST00000592012 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
MBD3-209ENST00000592012 Q6ZUG5 572 aa23.43■■□□□ 1.34
MBD3-209ENST00000592012 M0R2C6 588 aa23.43■■□□□ 1.34
MBD3-209ENST00000592012 PDIA4P13667 645 aaKnown RBP23.43■■□□□ 1.34
MBD3-209ENST00000592012 LARP1BQ659C4 914 aaKnown RBP23.43■■□□□ 1.34
MBD3-209ENST00000592012 HMGB1P09429 215 aaKnown RBP23.42■■□□□ 1.34
MBD3-209ENST00000592012 ZAP70P43403 619 aa23.42■■□□□ 1.34
MBD3-209ENST00000592012 NASPP49321 788 aaPredicted RBP23.42■■□□□ 1.34
MBD3-209ENST00000592012 ABCC12Q96J65 1359 aa23.42■■□□□ 1.34
MBD3-209ENST00000592012 ZFYP08048 801 aaPredicted RBP23.42■■□□□ 1.34
MBD3-209ENST00000592012 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
MBD3-209ENST00000592012 SLIT2O94813 1529 aa23.42■■□□□ 1.34
MBD3-209ENST00000592012 STK3Q13188 491 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 ITPK1Q13572 414 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 AK7Q96M32 723 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 SYCE3A1L190 88 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 PDE8BO95263 885 aa23.41■■□□□ 1.34
MBD3-209ENST00000592012 SUSD4Q5VX71 490 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms