RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
NPC1-213ENST00000591955 E9PCH4 1651 aa7.38□□□□□ -1.23
NPC1-213ENST00000591955 CANXP27824 592 aaKnown RBP7.37□□□□□ -1.23
NPC1-213ENST00000591955 HMGN5P82970 282 aaKnown RBP7.37□□□□□ -1.23
NPC1-213ENST00000591955 TMEM214Q6NUQ4 689 aaKnown RBP7.37□□□□□ -1.23
NPC1-213ENST00000591955 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
NPC1-213ENST00000591955 GJD4Q96KN9 370 aaPredicted RBP7.37□□□□□ -1.23
NPC1-213ENST00000591955 PPP1R9BQ96SB3 815 aa7.37□□□□□ -1.23
NPC1-213ENST00000591955 ANTXR1Q9H6X2 564 aa7.37□□□□□ -1.23
NPC1-213ENST00000591955 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
NPC1-213ENST00000591955 ABCC1P33527 1531 aa7.37□□□□□ -1.23
NPC1-213ENST00000591955 AGLP35573 1532 aa7.37□□□□□ -1.23
NPC1-213ENST00000591955 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 ZNF500O60304 480 aaPredicted RBP7.36□□□□□ -1.23
NPC1-213ENST00000591955 PDIA4P13667 645 aaKnown RBP7.36□□□□□ -1.23
NPC1-213ENST00000591955 FAM193AP78312 1265 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 NKAPLQ5M9Q1 402 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 AFAP1Q8N556 730 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 PMFBP1Q8TBY8 1022 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 TRIM11Q96F44 468 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 CRBNQ96SW2 442 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
NPC1-213ENST00000591955 PTPRKQ15262 1439 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 KIAA1107Q9UPP5 1409 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 PREX2Q70Z35 1606 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 GTF2E1P29083 439 aaPredicted RBP7.35□□□□□ -1.23
NPC1-213ENST00000591955 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
NPC1-213ENST00000591955 DMTNQ08495 405 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 NR1H3Q13133 447 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 CREBRFQ8IUR6 639 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 KDM4CQ9H3R0 1056 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 PLA2R1Q13018 1463 aa7.35□□□□□ -1.23
NPC1-213ENST00000591955 PLXNC1O60486 1568 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 VWDEQ8N2E2 1590 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 SPATA31C1P0DKV0 1188 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 ADH6P28332 368 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 RHBDD1Q8TEB9 315 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 TBC1D32Q96NH3 1257 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
NPC1-213ENST00000591955 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 PCDHGC4Q9Y5F7 938 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 ARHGAP31Q2M1Z3 1444 aa7.34□□□□□ -1.23
NPC1-213ENST00000591955 LAMC1P11047 1609 aa7.34□□□□□ -1.24
NPC1-213ENST00000591955 DNMT1P26358 1616 aaKnown RBP7.34□□□□□ -1.24
NPC1-213ENST00000591955 SCO2A0A1W2PP80 73 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 FCHSD1Q86WN1 690 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 HSCBQ8IWL3 235 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
NPC1-213ENST00000591955 TSPYL1Q9H0U9 437 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 GPBP1L1Q9HC44 474 aaPredicted RBP7.33□□□□□ -1.24
NPC1-213ENST00000591955 AVENQ9NQS1 362 aaPredicted RBP7.33□□□□□ -1.24
NPC1-213ENST00000591955 RGS17Q9UGC6 210 aaPredicted RBP7.33□□□□□ -1.24
NPC1-213ENST00000591955 NPATQ14207 1427 aa7.33□□□□□ -1.24
NPC1-213ENST00000591955 MLH3Q9UHC1 1453 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 MYCP01106 439 aaPredicted RBP7.32□□□□□ -1.24
NPC1-213ENST00000591955 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 ARTNQ5T4W7 220 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 SASS6Q6UVJ0 657 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 NLRP8Q86W28 1048 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 IPO4Q8TEX9 1081 aaKnown RBP7.32□□□□□ -1.24
NPC1-213ENST00000591955 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
NPC1-213ENST00000591955 ZFP64Q9NPA5 681 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 NOL7Q9UMY1 257 aaKnown RBP7.32□□□□□ -1.24
NPC1-213ENST00000591955 SAMD9LQ8IVG5 1584 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 CDC42BPAQ5VT25 1732 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 CPS1P31327 1500 aa7.32□□□□□ -1.24
NPC1-213ENST00000591955 KIF16BQ96L93 1317 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 NLRP1Q9C000 1473 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 RNF17Q9BXT8 1623 aaKnown RBP7.31□□□□□ -1.24
NPC1-213ENST00000591955 SLC20A2Q08357 652 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 CLEC17AQ6ZS10 378 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 SNX21Q969T3 373 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 CCDC85AQ96PX6 553 aaPredicted RBP7.31□□□□□ -1.24
NPC1-213ENST00000591955 TPSG1Q9NRR2 321 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 ZNF330Q9Y3S2 320 aaPredicted RBP7.31□□□□□ -1.24
NPC1-213ENST00000591955 NCOA3Q9Y6Q9 1424 aa7.31□□□□□ -1.24
NPC1-213ENST00000591955 NKTRP30414 1462 aaKnown RBP7.3□□□□□ -1.24
NPC1-213ENST00000591955 SHANK2Q9UPX8 1470 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 DYRK3O43781 588 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 ATP4AP20648 1035 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
NPC1-213ENST00000591955 TBC1D9Q6ZT07 1266 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 PDCL2Q8N4E4 241 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 SLKQ9H2G2 1235 aaPredicted RBP7.3□□□□□ -1.24
NPC1-213ENST00000591955 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 SYCP2Q9BX26 1530 aa7.3□□□□□ -1.24
NPC1-213ENST00000591955 INO80Q9ULG1 1556 aaPredicted RBP7.29□□□□□ -1.24
NPC1-213ENST00000591955 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
NPC1-213ENST00000591955 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
NPC1-213ENST00000591955 GPR37L1O60883 481 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms