RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CES1P23141 567 aa6.16□□□□□ -1.42
VMP1-212ENST00000591782 FAM35AQ86V20 835 aa6.16□□□□□ -1.42
VMP1-212ENST00000591782 ZSCAN29Q8IWY8 852 aaPredicted RBP6.16□□□□□ -1.42
VMP1-212ENST00000591782 ALKBH8Q96BT7 664 aaKnown RBP6.16□□□□□ -1.42
VMP1-212ENST00000591782 STARD13Q9Y3M8 1113 aa6.16□□□□□ -1.42
VMP1-212ENST00000591782 LOC102724428A0A0B4J2F2 783 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 TREHO43280 583 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 ALBP02768 609 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 EIF2AK2P19525 551 aaKnown RBP6.15□□□□□ -1.42
VMP1-212ENST00000591782 SIK1P57059 783 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 HYAL2Q12891 473 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 DSC3Q14574 896 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 PERM1Q5SV97 790 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 TMCO4Q5TGY1 634 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.42
VMP1-212ENST00000591782 ZFYVE28Q9HCC9 887 aa6.15□□□□□ -1.42
VMP1-212ENST00000591782 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 KIF4AO95239 1232 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 POLR3DP05423 398 aaPredicted RBP6.14□□□□□ -1.43
VMP1-212ENST00000591782 HOXB4P17483 251 aaPredicted RBP6.14□□□□□ -1.43
VMP1-212ENST00000591782 USPL1Q5W0Q7 1092 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 PSAPL1Q6NUJ1 521 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 C8orf86Q6ZUL3 223 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 NCAPG2Q86XI2 1143 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 NUDT8Q8WV74 236 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 PMEPA1Q969W9 287 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 LPIN3Q9BQK8 851 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 RRAGCQ9HB90 399 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 SALL4Q9UJQ4 1053 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 AMOTL2Q9Y2J4 779 aa6.14□□□□□ -1.43
VMP1-212ENST00000591782 M0R082 166 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 CPNE3O75131 537 aaKnown RBP6.13□□□□□ -1.43
VMP1-212ENST00000591782 GHRHP01286 108 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 NEFLP07196 543 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 ACPPP15309 386 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 DGKGP49619 791 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 SNRPNP63162 240 aaKnown RBP6.13□□□□□ -1.43
VMP1-212ENST00000591782 ATP11AP98196 1134 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 PLCB3Q01970 1234 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 KANK3Q6NY19 840 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 ELMSAN1Q6PJG2 1045 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 C20orf204Q6ZNR8 217 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 MICALL1Q8N3F8 863 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 ZNF417Q8TAU3 575 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 SPACA7Q96KW9 195 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 CSRNP1Q96S65 589 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 ZNF587Q96SQ5 575 aaPredicted RBP6.13□□□□□ -1.43
VMP1-212ENST00000591782 SMG9Q9H0W8 520 aaKnown RBP6.13□□□□□ -1.43
VMP1-212ENST00000591782 JPH1Q9HDC5 661 aaPredicted RBP6.13□□□□□ -1.43
VMP1-212ENST00000591782 ADAMTS8Q9UP79 889 aa6.13□□□□□ -1.43
VMP1-212ENST00000591782 EIF1AYO14602 144 aaKnown RBP6.12□□□□□ -1.43
VMP1-212ENST00000591782 MAPK8P45983 427 aa6.12□□□□□ -1.43
VMP1-212ENST00000591782 FMR1Q06787 632 aaKnown RBP eCLIP6.12□□□□□ -1.43
VMP1-212ENST00000591782 CEP120Q8N960 986 aa6.12□□□□□ -1.43
VMP1-212ENST00000591782 PLD4Q96BZ4 506 aa6.12□□□□□ -1.43
VMP1-212ENST00000591782 LATS2Q9NRM7 1088 aa6.12□□□□□ -1.43
VMP1-212ENST00000591782 FRRS1LQ9P0K9 344 aa6.12□□□□□ -1.43
VMP1-212ENST00000591782 PNMA6FA0A0J9YX94 578 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 TRPA1O75762 1119 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 RGS9O75916 674 aaPredicted RBP6.11□□□□□ -1.43
VMP1-212ENST00000591782 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
VMP1-212ENST00000591782 MFAP1P55081 439 aaKnown RBP6.11□□□□□ -1.43
VMP1-212ENST00000591782 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
VMP1-212ENST00000591782 RBSNQ9H1K0 784 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 DNAJC25Q9H1X3 360 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 NPHS2Q9NP85 383 aa6.11□□□□□ -1.43
VMP1-212ENST00000591782 CNTNAP5Q8WYK1 1306 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 LILRB5O75023 590 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 EDN3P14138 238 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 AFF1P51825 1210 aaKnown RBP6.1□□□□□ -1.43
VMP1-212ENST00000591782 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
VMP1-212ENST00000591782 CEP135Q66GS9 1140 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 NPAS4Q8IUM7 802 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 GALNT12Q8IXK2 581 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 CCDC74AQ96AQ1 378 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 HHIPQ96QV1 700 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 SETDB2Q96T68 719 aa6.1□□□□□ -1.43
VMP1-212ENST00000591782 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 NFKBIEO00221 500 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 IRS1P35568 1242 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 COL9A3Q14050 684 aaPredicted RBP6.09□□□□□ -1.43
VMP1-212ENST00000591782 GRIK5Q16478 980 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 ADAMTSL4Q6UY14 1074 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 LINC00114Q6XXX2 140 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 TTC9Q92623 222 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 OSMRQ99650 979 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 PBX4Q9BYU1 374 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 PRDM6Q9NQX0 595 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 STK17AQ9UEE5 414 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 TRIM33Q9UPN9 1127 aa6.09□□□□□ -1.43
VMP1-212ENST00000591782 SMNDC1O75940 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
VMP1-212ENST00000591782 NID1P14543 1247 aa6.08□□□□□ -1.44
VMP1-212ENST00000591782 GDF6Q6KF10 455 aaPredicted RBP6.08□□□□□ -1.44
VMP1-212ENST00000591782 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
VMP1-212ENST00000591782 EPS8L3Q8TE67 593 aaKnown RBP6.08□□□□□ -1.44
VMP1-212ENST00000591782 MKL2Q9ULH7 1088 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms